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ypssc
View on CRAN: Click
here
Download and install ypssc package within the R console
Install from CRAN:
install.packages("ypssc")
Install from Github:
library("remotes")
install_github("cran/ypssc")
Install by package version:
library("remotes")
install_version("ypssc", "1.1.0")
Attach the package and use:
library("ypssc")
Maintained by
Shashank Kumbhare
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-11-19
Latest Update: 2021-11-27
Description:
An extension for 'NetSurfP-2.0' (Klausen et al. (2019) <doi:10.1002/prot.25674>) which is specifically designed to analyze the results of bottom-up-proteomics that is primarily analyzed with 'MaxQuant' (Cox, J., Mann, M. (2008) <doi:10.1038/nbt.1511>). This tool is designed to process a large number of yeast peptides that produced as a results of whole yeast cell-proteome digestion and provide a coherent picture of secondary structure of proteins.
How to cite:
Shashank Kumbhare (2021). ypssc: Yeast-Proteome Secondary-Structure Calculator. R package version 1.1.0, https://cran.r-project.org/web/packages/ypssc
Previous versions and publish date:
1.0.0 (2021-11-19 07:50)
Other packages that cited ypssc R package
View ypssc citation profile
Other R packages that ypssc depends,
imports, suggests or enhances
Functions, R codes and Examples using
the ypssc R package
Some associated functions: findAlpha . findBeta . findChain . findSecondary . ypssc-package .
Some associated R codes: Err.R . auxil.R . calculationAlphaHelix.R . calculationBetaSheet.R . calculationChain.R . exit.R . findAlpha.R . findBeta.R . findChain.R . findSecondary.R . ypssc-package.R . Full ypssc package functions and examples
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