Other packages > Find by keyword >

ypssc  

Yeast-Proteome Secondary-Structure Calculator
View on CRAN: Click here


Download and install ypssc package within the R console
Install from CRAN:
install.packages("ypssc")

Install from Github:
library("remotes")
install_github("cran/ypssc")

Install by package version:
library("remotes")
install_version("ypssc", "1.1.0")



Attach the package and use:
library("ypssc")
Maintained by
Shashank Kumbhare
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-11-19
Latest Update: 2021-11-27
Description:
An extension for 'NetSurfP-2.0' (Klausen et al. (2019) <doi:10.1002/prot.25674>) which is specifically designed to analyze the results of bottom-up-proteomics that is primarily analyzed with 'MaxQuant' (Cox, J., Mann, M. (2008) <doi:10.1038/nbt.1511>). This tool is designed to process a large number of yeast peptides that produced as a results of whole yeast cell-proteome digestion and provide a coherent picture of secondary structure of proteins.
How to cite:
Shashank Kumbhare (2021). ypssc: Yeast-Proteome Secondary-Structure Calculator. R package version 1.1.0, https://cran.r-project.org/web/packages/ypssc. Accessed 08 Mar. 2026.
Previous versions and publish date:
1.0.0 (2021-11-19 07:50)
Other packages that cited ypssc R package
View ypssc citation profile
Other R packages that ypssc depends, imports, suggests or enhances
Complete documentation for ypssc
Functions, R codes and Examples using the ypssc R package
Some associated functions: findAlpha . findBeta . findChain . findSecondary . ypssc-package . 
Some associated R codes: Err.R . auxil.R . calculationAlphaHelix.R . calculationBetaSheet.R . calculationChain.R . exit.R . findAlpha.R . findBeta.R . findChain.R . findSecondary.R . ypssc-package.R .  Full ypssc package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

osmextract  
Download and Import Open Street Map Data Extracts
Match, download, convert and import Open Street Map data extracts obtained from several providers. ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
GMKMcharlie  
Unsupervised Gaussian Mixture and Minkowski and Spherical K-Means with Constraints
High performance trainers for parameterizing and clustering weighted data. The Gaussian mixture (GM) ...
Download / Learn more Package Citations See dependency  
MultivariateAnalysis  
Pacote Para Analise Multivariada
Package with multivariate analysis methodologies for experiment evaluation. The package estimates d ...
Download / Learn more Package Citations See dependency  
RCPA3  
Data and Functions for R Companion to Political Analysis 3rd Ed
Bundles the datasets and functions featured in Philip H. Pollock and Barry C. Edwards ...
Download / Learn more Package Citations See dependency  

26,293

R Packages

223,360

Dependencies

70,376

Author Associations

26,294

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA