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scregclust  

Reconstructing the Regulatory Programs of Target Genes in scRNA-Seq Data
View on CRAN: Click here


Download and install scregclust package within the R console
Install from CRAN:
install.packages("scregclust")

Install from Github:
library("remotes")
install_github("cran/scregclust")

Install by package version:
library("remotes")
install_version("scregclust", "0.2.2")



Attach the package and use:
library("scregclust")
Maintained by
Felix Held
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-11-21
Latest Update: 2025-07-27
Description:
Implementation of the scregclust algorithm described in Larsson, Held, et al. (2024) <doi:10.1038/s41467-024-53954-3> which reconstructs regulatory programs of target genes in scRNA-seq data. Target genes are clustered into modules and each module is associated with a linear model describing the regulatory program.
How to cite:
Felix Held (2024). scregclust: Reconstructing the Regulatory Programs of Target Genes in scRNA-Seq Data. R package version 0.2.2, https://cran.r-project.org/web/packages/scregclust. Accessed 05 Jun. 2026.
Previous versions and publish date:
0.1.10 (2024-11-21 08:30), 0.2.0 (2024-12-06 15:30), 0.2.1 (2025-07-24 17:40), 0.2.2 (2025-07-27 23:50), 0.2.3 (2026-04-05 12:50)
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Complete documentation for scregclust
Functions, R codes and Examples using the scregclust R package
Full scregclust package functions and examples
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