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rmzqc
View on CRAN: Click
here
Download and install rmzqc package within the R console
Install from CRAN:
install.packages("rmzqc")
Install from Github:
library("remotes")
install_github("cran/rmzqc")
Install by package version:
library("remotes")
install_version("rmzqc", "0.5.4")
Attach the package and use:
library("rmzqc")
Maintained by
Chris Bielow
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-08-18
Latest Update: 2023-08-25
Description:
Reads, writes and validates 'mzQC' files. The 'mzQC' format is a
standardized file format for the exchange, transmission, and archiving of
quality metrics derived from biological mass spectrometry data, as defined
by the HUPO-PSI (Human Proteome Organisation - Proteomics Standards Initiative)
Quality Control working group.
See for details.
How to cite:
Chris Bielow (2022). rmzqc: Creation, Reading and Validation of 'mzqc' Files. R package version 0.5.4, https://cran.r-project.org/web/packages/rmzqc. Accessed 30 Jan. 2025.
Previous versions and publish date:
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imports, suggests or enhances
Complete documentation for rmzqc
Functions, R codes and Examples using
the rmzqc R package
Some associated functions: CV_ . MzQCDateTime-class . MzQCanalysisSoftware-class . MzQCbaseQuality-class . MzQCcontrolledVocabulary-class . MzQCcvParameter-class . MzQCinputFile-class . MzQCmetadata-class . MzQCmzQC-class . MzQCqualityMetric-class . MzQCrunQuality-class . MzQCsetQuality-class . NULL_to_NA . NULL_to_charNA . check_type . filenameToCV . fromDatatoMzQC . fromDatatoMzQCobj . getCVDictionary . getCVInfo . getCVSingleton . getCVTemplate . getDefaultCV . getLatest_PSICV_URL . getLocal_CV_Version . getQualityMetricTemplate . getSyntaxValidator . hasFileSuffix . isUndefined . isValidMzQC . localFileToURI . parseOBO . readMZQC . removeFileSuffix . removeIfExists . rmzqc-package . toAnalysisSoftware . toQCMetric . validateFromFile . validateFromObj . validateFromString . writeMZQC .
Some associated R codes: conversion.R . io.R . misc.R . mzQC.R . obo.R . rmzqc-package.R . rmzqc.R . templates.R . validator.R . Full rmzqc package functions and examples
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