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rexpokit
View on CRAN: Click
here
Download and install rexpokit package within the R console
Install from CRAN:
install.packages("rexpokit")
Install from Github:
library("remotes")
install_github("cran/rexpokit")
Install by package version:
library("remotes")
install_version("rexpokit", "0.26.6.14")
Attach the package and use:
library("rexpokit")
Maintained by
Nicholas J. Matzke
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2013-02-11
Latest Update: 2023-06-21
Description:
Wraps some of the matrix exponentiation
utilities from EXPOKIT ( ),
a FORTRAN library that is widely recommended for matrix
exponentiation (Sidje RB, 1998. "Expokit: A Software Package
for Computing Matrix Exponentials." ACM Trans. Math. Softw.
24(1): 130-156). EXPOKIT includes functions for
exponentiating both small, dense matrices, and large, sparse
matrices (in sparse matrices, most of the cells have value 0).
Rapid matrix exponentiation is useful in phylogenetics when we
have a large number of states (as we do when we are inferring
the history of transitions between the possible geographic
ranges of a species), but is probably useful in other ways as
well. NOTE: In case FORTRAN checks temporarily get rexpokit
archived on CRAN, see archived binaries at GitHub in:
nmatzke/Matzke_R_binaries (binaries install without compilation
of source code).
How to cite:
Nicholas J. Matzke (2013). rexpokit: R Wrappers for EXPOKIT; Other Matrix Functions. R package version 0.26.6.14, https://cran.r-project.org/web/packages/rexpokit. Accessed 21 Dec. 2024.
Previous versions and publish date:
0.23 (2013-02-11 21:02), 0.24.1 (2013-07-15 07:25), 0.24 (2013-02-16 09:19), 0.26.1 (2017-08-16 00:19), 0.26.2 (2018-01-30 21:46), 0.26.3 (2018-05-06 09:55), 0.26.6.2 (2019-06-27 13:10), 0.26.6.4 (2019-07-02 07:40), 0.26.6.5 (2019-10-08 08:20), 0.26.6.6 (2019-11-04 09:40), 0.26.6.7 (2020-07-05 00:20), 0.26.6.9 (2023-06-21 12:30), 0.26.6.12 (2023-10-30 09:10), 0.26.6 (2018-10-02 06:32)
Other packages that cited rexpokit R package
View rexpokit citation profile
Other R packages that rexpokit depends,
imports, suggests or enhances
Complete documentation for rexpokit
Functions, R codes and Examples using
the rexpokit R package
Some associated functions: 00_rexpokit-package . 01_expm . expokit_dgexpv_Qmat . expokit_dgpadm_Qmat . expokit_dmexpv_Qmat . expokit_itscale5_wrapper . expokit_wrapalldgexpv_tvals . expokit_wrapalldmexpv_tvals . maxent . zzz_SparseM_coo_to_REXPOKIT_coo . zzz_coo2mat . zzz_mat2coo . zzz_mat2coo_forloop .
Some associated R codes: fermat.R . maxent.R . rexpokit-package.R . rexpokit.R . Full rexpokit package functions and examples
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