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pulseTD  

Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data
View on CRAN: Click here


Download and install pulseTD package within the R console
Install from CRAN:
install.packages("pulseTD")

Install from Github:
library("remotes")
install_github("cran/pulseTD")

Install by package version:
library("remotes")
install_version("pulseTD", "0.1.0")



Attach the package and use:
library("pulseTD")
Maintained by
XinWang
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-05-17
Latest Update: 2019-05-17
Description:
A tool for analyzing the transcription, processing and degradation rates of genes by 4sU-seq (the Metabolic Label 4-thiouridine) data and RNA-seq (RNA sequencing) data. It can not only recognize the transcriptional dynamic rates at the measurement time points, but also obtain continuous changes in transcriptional dynamics. More importantly, it is able to predict the trend of mRNA (Mature RNA) transcription and expression changes in the future.
How to cite:
XinWang (2019). pulseTD: Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data. R package version 0.1.0, https://cran.r-project.org/web/packages/pulseTD. Accessed 21 Dec. 2024.
Previous versions and publish date:
0.1.0 (2019-05-17 11:20)
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