Other packages > Find by keyword >

pulseTD  

Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data
View on CRAN: Click here


Download and install pulseTD package within the R console
Install from CRAN:
install.packages("pulseTD")

Install from Github:
library("remotes")
install_github("cran/pulseTD")

Install by package version:
library("remotes")
install_version("pulseTD", "0.1.0")



Attach the package and use:
library("pulseTD")
Maintained by
XinWang
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-05-17
Latest Update:
Description:
A tool for analyzing the transcription, processing and degradation rates of genes by 4sU-seq (the Metabolic Label 4-thiouridine) data and RNA-seq (RNA sequencing) data. It can not only recognize the transcriptional dynamic rates at the measurement time points, but also obtain continuous changes in transcriptional dynamics. More importantly, it is able to predict the trend of mRNA (Mature RNA) transcription and expression changes in the future.
How to cite:
XinWang (2019). pulseTD: Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data. R package version 0.1.0, https://cran.r-project.org/web/packages/pulseTD. Accessed 16 Jul. 2026.
Previous versions and publish date:
(2026-07-09 06:44), 0.1.0 (2019-05-17 11:20)
Other packages that cited pulseTD R package
View pulseTD citation profile
Other R packages that pulseTD depends, imports, suggests or enhances
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
schoolmath  
Functions and Datasets for Math Used in School
Contains functions and datasets for math taught in school. A main focus is set to prime-calculation. ...
Download / Learn more Package Citations See dependency  
stevedata  
Steve's Toy Data for Teaching About a Variety of Methodological, Social, and Political Topics
This is a collection of various kinds of data with broad uses for teaching. My students, and academ ...
Download / Learn more Package Citations See dependency  
tibble  
Simple Data Frames
Provides a 'tbl_df' class (the 'tibble') with stricter checking and better formatting than the tradi ...
Download / Learn more Package Citations See dependency  
wordnet  
WordNet Interface
An interface to WordNet using the Jawbone Java API to WordNet. WordNet (< ...
Download / Learn more Package Citations See dependency  
bbdetection  
Identification of Bull and Bear States of the Market
Implements two algorithms of detecting Bull and Bear markets in stock prices: the algorithm of Pagan ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA