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protein8k
View on CRAN: Click
here
Download and install protein8k package within the R console
Install from CRAN:
install.packages("protein8k")
Install from Github:
library("remotes")
install_github("cran/protein8k")
Install by package version:
library("remotes")
install_version("protein8k", "0.0.1")
Attach the package and use:
library("protein8k")
Maintained by
Simon Liles
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-08-16
Latest Update: 2021-08-16
Description:
Read Protein Data Bank (PDB) files, performs its analysis, and
presents the result using different visualization types including 3D. The
package also has additional capability for handling Virus Report data from
the National Center for Biotechnology Information (NCBI) database.
Nature Structural Biology 10, 980 (2003) .
US National Library of Medicine (2021) .
How to cite:
Simon Liles (2021). protein8k: Perform Analysis and Create Visualizations of Proteins. R package version 0.0.1, https://cran.r-project.org/web/packages/protein8k. Accessed 22 Dec. 2024.
Previous versions and publish date:
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Complete documentation for protein8k
Functions, R codes and Examples using
the protein8k R package
Some associated functions: Protein-class . Protein-summary . Protein3D . fromJSONL . getAtomicRecord . getTitleSection . p53_tetramerization . plot3D . plotModels . read.pdb . report_as_dataframe . summary.Protein . write_viz .
Some associated R codes: Data.R . fromJSONL.R . getAtomicRecord.R . getTitleSection.R . plot3DInteractiveShinyApp.R . plotModels.R . plotProtein3D.R . proteinClassDefinition.R . read.pdb.R . report_as_dataframe.R . summary.Protein.R . summary.S4.R . write_viz.R . Full protein8k package functions and examples
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