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popEpi
View on CRAN: Click
here
Download and install popEpi package within the R console
Install from CRAN:
install.packages("popEpi")
Install from Github:
library("remotes")
install_github("cran/popEpi") Install by package version:
library("remotes")
install_version("popEpi", "0.4.13") Attach the package and use:
library("popEpi")
Maintained by
Joonas Miettinen
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-09-29
Latest Update: 2025-01-31
Description:
Enables computation of epidemiological statistics, including
those where counts or mortality rates of the reference population are
used. Currently supported: excess hazard models (Dickman, Sloggett,
Hills, and Hakulinen (2012) ), rates, mean
survival times, relative/net survival (in particular the Ederer II
(Ederer and Heise (1959)) and Pohar Perme (Pohar Perme, Stare, and
Esteve (2012) ) estimators), and
standardized incidence and mortality ratios, all of which can be
easily adjusted for by covariates such as age. Fast splitting and
aggregation of 'Lexis' objects (from package 'Epi') and other
computations achieved using 'data.table'.
How to cite:
Joonas Miettinen (2015). popEpi: Functions for Epidemiological Analysis using Population Data. R package version 0.4.13, https://cran.r-project.org/web/packages/popEpi. Accessed 25 Aug. 2026.
Previous versions and publish date:
(2026-07-09 06:43), 0.2.1 (2015-09-29 17:33), 0.3.0 (2016-03-31 19:35), 0.3.1 (2016-04-25 16:52), 0.4.0 (2016-09-23 22:40), 0.4.1 (2016-11-08 18:36), 0.4.2 (2017-08-10 16:21), 0.4.3 (2017-09-05 19:39), 0.4.4 (2017-11-14 15:11), 0.4.5 (2018-05-16 18:34), 0.4.6 (2019-02-14 11:00), 0.4.7 (2019-03-18 17:50), 0.4.8 (2019-09-28 17:20), 0.4.9 (2021-10-29 10:20), 0.4.10 (2022-09-25 18:40), 0.4.11 (2023-08-23 16:30), 0.4.12 (2024-05-10 11:00), 0.4.13 (2025-01-31 12:00), 0.4.14 (2026-02-12 15:00)
Other packages that cited popEpi R package
View popEpi citation profile
Other R packages that popEpi depends,
imports, suggests or enhances
Complete documentation for popEpi
Functions, R codes and Examples using
the popEpi R package
Some associated functions: ICSS . Lexis_fpa . RPL . Surv . adjust . aggre . all_names_present . array_df_ratetable_utils . as.Date.yrs . as.aggre . cast_simple . cut_bound . direct_standardization . fac2num . flexible_argument . get.yrs . is.Date . is_leap_year . lexpand . lines.sirspline . lines.survmean . lines.survtab . lower_bound . ltable . meanpop_fi . na2zero . plot.rate . plot.sir . plot.sirspline . plot.survmean . plot.survtab . poisson.ci . popEpi-package . pophaz . popmort . prepExpo . print.aggre . print.rate . print.survtab . rate . rate_ratio . relpois . relpois_ag . robust_values . rpcurve . setaggre . setclass . setcolsnull . sibr . sir . sir_exp . sir_ratio . sire . sirspline . splitLexisDT . splitMulti . stdpop101 . stdpop18 . summary.aggre . summary.survtab . survmean . survtab . survtab_ag . try2int .
Some associated R codes: S3_definitions.R . Surv.R . aggregating.R . data_document.R . direct_adjusting.R . evaluation.R . flexyargs.R . fractional_years.R . incidence_rates.R . incidence_rates_utils.R . lexpand.R . long_df_and_array.R . ltable.R . mean_survival.R . popEpi-package.R . pophaz.R . prevalence.R . relative_poisson.R . relative_poisson_net_survival.R . sir.R . sir_utils.R . splitLexisDT.R . splitMulti.R . splitting_utility_functions.R . startup_message.R . survival_aggregated.R . survival_lexis.R . survival_utility_functions.R . utility_functions.R . weighted_table.R . Full popEpi package functions and examples
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