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optrcdmaeAT  

Optimal Row-Column Designs for Two-Colour cDNA Microarray Experiments
View on CRAN: Click here


Download and install optrcdmaeAT package within the R console
Install from CRAN:
install.packages("optrcdmaeAT")

Install from Github:
library("remotes")
install_github("cran/optrcdmaeAT")

Install by package version:
library("remotes")
install_version("optrcdmaeAT", "1.0.0")



Attach the package and use:
library("optrcdmaeAT")
Maintained by
Dibaba Bayisa Gemechu
[Scholar Profile | Author Map]
First Published: 2017-04-12
Latest Update: 2017-04-12
Description:
Computes A-, MV-, D- and E-optimal or near-optimal row-column designs for two-colour cDNA microarray experiments using the linear fixed effects and mixed effects models where the interest is in a comparison of all pairwise treatment contrasts. The algorithms used in this package are based on the array exchange and treatment exchange algorithms adopted from Debusho, Gemechu and Haines (2016, unpublished) algorithms after adjusting for the row-column designs setup. The package also provides an optional method of using the graphical user interface (GUI) R package tcltk to ensure that it is user friendly.
How to cite:
Dibaba Bayisa Gemechu (2017). optrcdmaeAT: Optimal Row-Column Designs for Two-Colour cDNA Microarray Experiments. R package version 1.0.0, https://cran.r-project.org/web/packages/optrcdmaeAT. Accessed 14 Apr. 2025.
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