Other packages > Find by keyword >

openEBGM  

EBGM Disproportionality Scores for Adverse Event Data Mining
View on CRAN: Click here


Download and install openEBGM package within the R console
Install from CRAN:
install.packages("openEBGM")

Install from Github:
library("remotes")
install_github("cran/openEBGM")

Install by package version:
library("remotes")
install_version("openEBGM", "0.9.1")



Attach the package and use:
library("openEBGM")
Maintained by
John Ihrie
[Scholar Profile | Author Map]
First Published: 2017-05-05
Latest Update: 2023-09-14
Description:
An implementation of DuMouchel's (1999) Bayesian data mining method for the market basket problem. Calculates Empirical Bayes Geometric Mean (EBGM) and posterior quantile scores using the Gamma-Poisson Shrinker (GPS) model to find unusually large cell counts in large, sparse contingency tables. Can be used to find unusually high reporting rates of adverse events associated with products. In general, can be used to mine any database where the co-occurrence of two variables or items is of interest. Also calculates relative and proportional reporting ratios. Builds on the work of the 'PhViD' package, from which much of the code is derived. Some of the added features include stratification to adjust for confounding variables and data squashing to improve computational efficiency. Includes an implementation of the EM algorithm for hyperparameter estimation loosely derived from the 'mederrRank' package.
How to cite:
John Ihrie (2017). openEBGM: EBGM Disproportionality Scores for Adverse Event Data Mining. R package version 0.9.1, https://cran.r-project.org/web/packages/openEBGM. Accessed 30 Apr. 2025.
Previous versions and publish date:
0.1.0 (2017-05-05 20:09), 0.2.0 (2017-07-31 23:52), 0.3.0 (2017-11-15 23:26), 0.4.0 (2018-03-09 17:48), 0.5.0 (2018-04-02 18:15), 0.6.0 (2018-05-21 22:08), 0.7.0 (2018-08-16 20:00), 0.8.0 (2019-01-30 00:20), 0.8.1 (2019-02-28 21:10), 0.8.2 (2019-04-25 17:40), 0.8.3 (2020-03-02 21:20)
Other packages that cited openEBGM R package
View openEBGM citation profile
Other R packages that openEBGM depends, imports, suggests or enhances
Complete documentation for openEBGM
Downloads during the last 30 days
03/3104/0104/0204/0304/0404/0504/0604/0704/0804/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/29Downloads for openEBGM246810121416182022242628TrendBars

Today's Hot Picks in Authors and Packages

schrute  
The Entire Transcript from the Office in Tidy Format
The complete scripts from the American version of the Office television show in tibble format. Use ...
Download / Learn more Package Citations See dependency  
micEconAids  
Demand Analysis with the Almost Ideal Demand System (AIDS)
Functions and tools for analysing consumer demand with the Almost Ideal Demand System (AIDS) sugg ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
eyetrackingR  
Eye-Tracking Data Analysis
Addresses tasks along the pipeline from raw data to analysis and visualization for eye-tracking dat ...
Download / Learn more Package Citations See dependency  
GRAPE  
Gene-Ranking Analysis of Pathway Expression
Gene-Ranking Analysis of Pathway Expression (GRAPE) is a tool for summarizing the consensus behavio ...
Download / Learn more Package Citations See dependency  
crimeutils  
A Comprehensive Set of Functions to Clean, Analyze, and Present Crime Data
A collection of functions that make it easier to understand crime (or other) data, and assist other ...
Download / Learn more Package Citations See dependency  

24,142

R Packages

207,311

Dependencies

65,176

Author Associations

24,143

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA