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ogrdbstats
View on CRAN: Click
here
Download and install ogrdbstats package within the R console
Install from CRAN:
install.packages("ogrdbstats")
Install from Github:
library("remotes")
install_github("cran/ogrdbstats") Install by package version:
library("remotes")
install_version("ogrdbstats", "0.5.4") Attach the package and use:
library("ogrdbstats")
Maintained by
William Lees
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-03-09
Latest Update: 2025-07-07
Description:
Multiple tools are now available for inferring the personalised
germ line set from an adaptive immune receptor repertoire.
Output from these tools is converted to
a single format and supplemented with rich data such as usage and
characterisation of 'novel' germ line alleles. This data can be
particularly useful when considering the validity of novel inferences. Use
of the analysis provided is described in .
How to cite:
William Lees (2023). ogrdbstats: Analysis of Adaptive Immune Receptor Repertoire Germ Line Statistics. R package version 0.5.4, https://cran.r-project.org/web/packages/ogrdbstats. Accessed 15 Jul. 2026.
Previous versions and publish date:
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Complete documentation for ogrdbstats
Functions, R codes and Examples using
the ogrdbstats R package
Some associated functions: example_rep . generate_ogrdb_report . genotype_statistics_cmd . make_barplot_grobs . make_haplo_grobs . make_novel_base_grobs . read_input_files . write_genotype_file . write_plot_file .
Some associated R codes: command_line.R . data.R . gene_names.R . genotype_statistics.R . plots.R . sequence_stats.R . Full ogrdbstats package functions and examples
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