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miLineage  

Association Tests for Microbial Lineages on a Taxonomic Tree
View on CRAN: Click here


Download and install miLineage package within the R console
Install from CRAN:
install.packages("miLineage")

Install from Github:
library("remotes")
install_github("cran/miLineage")

Install by package version:
library("remotes")
install_version("miLineage", "2.1")



Attach the package and use:
library("miLineage")
Maintained by
Zheng-Zheng Tang
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2017-10-20
Latest Update: 2018-03-23
Description:
A variety of association tests for microbiome data analysis including Quasi-Conditional Association Tests (QCAT) described in Tang Z.-Z. et al.(2017) and Zero-Inflated Generalized Dirichlet Multinomial (ZIGDM) tests described in Tang Z.-Z. & Chen G. (2017, submitted).
How to cite:
Zheng-Zheng Tang (2017). miLineage: Association Tests for Microbial Lineages on a Taxonomic Tree. R package version 2.1, https://cran.r-project.org/web/packages/miLineage
Previous versions and publish date:
2.0 (2017-10-20 11:12)
Other packages that cited miLineage R package
View miLineage citation profile
Other R packages that miLineage depends, imports, suggests or enhances
Functions, R codes and Examples using the miLineage R package
Some associated functions: QCAT . QCAT_GEE . ZIGDM . data.real . data.toy . miLineage-package . 
Some associated R codes: miLineage.R .  Full miLineage package functions and examples
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