Other packages > Find by keyword >

metaprotr  

Metaproteomics Post-Processing Analysis
View on CRAN: Click here


Download and install metaprotr package within the R console
Install from CRAN:
install.packages("metaprotr")

Install from Github:
library("remotes")
install_github("cran/metaprotr")

Install by package version:
library("remotes")
install_version("metaprotr", "1.2.2")



Attach the package and use:
library("metaprotr")
Maintained by
Aaron Millan-Oropeza
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-02-05
Latest Update: 2021-02-05
Description:
Set of tools for descriptive analysis of metaproteomics data generated from high-throughput mass spectrometry instruments. These tools allow to cluster peptides and proteins abundance, expressed as spectral counts, and to manipulate them in groups of metaproteins. This information can be represented using multiple visualization functions to portray the global metaproteome landscape and to differentiate samples or conditions, in terms of abundance of metaproteins, taxonomic levels and/or functional annotation. The provided tools allow to implement flexible analytical pipelines that can be easily applied to studies interested in metaproteomics analysis.
How to cite:
Aaron Millan-Oropeza (2021). metaprotr: Metaproteomics Post-Processing Analysis. R package version 1.2.2, https://cran.r-project.org/web/packages/metaprotr. Accessed 15 Jul. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited metaprotr R package
View metaprotr citation profile
Other R packages that metaprotr depends, imports, suggests or enhances
Complete documentation for metaprotr
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

binhf  
Haar-Fisz Functions for Binomial Data
Binomial Haar-Fisz transforms for Gaussianization as in Nunes and Nason (2009). ...
Download / Learn more Package Citations See dependency  
SECFISH  
Disaggregate Variable Costs
These functions were developed within SECFISH project (Strengthening regional cooperation in the are ...
Download / Learn more Package Citations See dependency  
PermAlgo  
Permutational Algorithm to Simulate Survival Data
This version of the permutational algorithm generates a dataset in which event and censoring times ...
Download / Learn more Package Citations See dependency  
footBayes  
Fitting Bayesian and MLE Football Models
This is the first package allowing for the estimation, visualization and prediction of the most wel ...
Download / Learn more Package Citations See dependency  
pulseTD  
Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data
A tool for analyzing the transcription, processing and degradation rates of genes by 4sU-seq (the Me ...
Download / Learn more Package Citations See dependency  
gscaLCA  
Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression
Execute Latent Class Analysis (LCA) and Latent Class Regression (LCR) by using Generalized Structu ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA