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metaprotr  

Metaproteomics Post-Processing Analysis
View on CRAN: Click here


Download and install metaprotr package within the R console
Install from CRAN:
install.packages("metaprotr")

Install from Github:
library("remotes")
install_github("cran/metaprotr")

Install by package version:
library("remotes")
install_version("metaprotr", "1.2.2")



Attach the package and use:
library("metaprotr")
Maintained by
Aaron Millan-Oropeza
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-02-05
Latest Update: 2021-02-05
Description:
Set of tools for descriptive analysis of metaproteomics data generated from high-throughput mass spectrometry instruments. These tools allow to cluster peptides and proteins abundance, expressed as spectral counts, and to manipulate them in groups of metaproteins. This information can be represented using multiple visualization functions to portray the global metaproteome landscape and to differentiate samples or conditions, in terms of abundance of metaproteins, taxonomic levels and/or functional annotation. The provided tools allow to implement flexible analytical pipelines that can be easily applied to studies interested in metaproteomics analysis.
How to cite:
Aaron Millan-Oropeza (2021). metaprotr: Metaproteomics Post-Processing Analysis. R package version 1.2.2, https://cran.r-project.org/web/packages/metaprotr. Accessed 25 Aug. 2026.
Previous versions and publish date:
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