Other packages > Find by keyword >

metaprotr  

Metaproteomics Post-Processing Analysis
View on CRAN: Click here


Download and install metaprotr package within the R console
Install from CRAN:
install.packages("metaprotr")

Install from Github:
library("remotes")
install_github("cran/metaprotr")

Install by package version:
library("remotes")
install_version("metaprotr", "1.2.2")



Attach the package and use:
library("metaprotr")
Maintained by
Aaron Millan-Oropeza
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-02-05
Latest Update: 2021-02-05
Description:
Set of tools for descriptive analysis of metaproteomics data generated from high-throughput mass spectrometry instruments. These tools allow to cluster peptides and proteins abundance, expressed as spectral counts, and to manipulate them in groups of metaproteins. This information can be represented using multiple visualization functions to portray the global metaproteome landscape and to differentiate samples or conditions, in terms of abundance of metaproteins, taxonomic levels and/or functional annotation. The provided tools allow to implement flexible analytical pipelines that can be easily applied to studies interested in metaproteomics analysis.
How to cite:
Aaron Millan-Oropeza (2021). metaprotr: Metaproteomics Post-Processing Analysis. R package version 1.2.2, https://cran.r-project.org/web/packages/metaprotr. Accessed 04 Aug. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited metaprotr R package
View metaprotr citation profile
Other R packages that metaprotr depends, imports, suggests or enhances
Complete documentation for metaprotr
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

ggconf  
Simpler Appearance Modification of "ggplot2"
A flexible interface for ggplot2theme potentially saving 50 of your typing. ...
Download / Learn more Package Citations See dependency  
sValues  
Measures of Sturdiness of Regression Coefficients
Implements the s-values proposed by Ed. Leamer. It provides a context-minimal approach for sensitivi ...
Download / Learn more Package Citations See dependency  
epigraphdb  
Interface Package for the 'EpiGraphDB' Platform
The interface package to access data from the 'EpiGraphDB' platform. It p ...
Download / Learn more Package Citations See dependency  
Maintainer: Yi Liu (view profile)
rCMA  
R-to-Java Interface for 'CMA-ES'
Tool for providing access to the Java version 'CMAEvolutionStrategy' of Nikolaus Hansen. 'CMA-ES' i ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
GLMMadaptive  
Generalized Linear Mixed Models using Adaptive Gaussian Quadrature
Fits generalized linear mixed models for a single grouping factor under maximum likelihood approxim ...
Download / Learn more Package Citations See dependency  

28,083

R Packages

239,283

Dependencies

74,457

Author Associations

28,084

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA