Other packages > Find by keyword >

ibdsim2  

Simulation of Chromosomal Regions Shared by Family Members
View on CRAN: Click here


Download and install ibdsim2 package within the R console
Install from CRAN:
install.packages("ibdsim2")

Install from Github:
library("remotes")
install_github("cran/ibdsim2")

Install by package version:
library("remotes")
install_version("ibdsim2", "2.0.0")



Attach the package and use:
library("ibdsim2")
Maintained by
Magnus Dehli Vigeland
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-06-28
Latest Update: 2023-08-17
Description:
Simulation of segments shared identical-by-descent (IBD) by pedigree members. Using sex specific recombination rates along the human genome (Halldorsson et al. (2019) ), phased chromosomes are simulated for all pedigree members. Applications include calculation of realised relatedness coefficients and IBD segment distributions. 'ibdsim2' is part of the 'ped suite' collection of packages for pedigree analysis. A detailed presentation of the 'ped suite', including a separate chapter on 'ibdsim2', is available in the book 'Pedigree analysis in R' (Vigeland, 2021, ISBN:9780128244302). A 'shiny' app for visualising and comparing IBD distributions is available at .
How to cite:
Magnus Dehli Vigeland (2020). ibdsim2: Simulation of Chromosomal Regions Shared by Family Members. R package version 2.0.0, https://cran.r-project.org/web/packages/ibdsim2
Previous versions and publish date:
1.1 (2020-06-28 11:40), 1.2 (2020-07-12 00:00), 1.3.0 (2020-11-13 13:50), 1.4.0 (2021-07-24 06:30), 1.5.0 (2022-06-07 22:40)
Other packages that cited ibdsim2 R package
View ibdsim2 citation profile
Other R packages that ibdsim2 depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

critpath  
Setting the Critical Path in Project Management
Solving the problem of project management using CPM (Critical Path Method), PERT (Program Evaluation ...
Download / Learn more Package Citations See dependency  
rdbnomics  
Download DBnomics Data
R access to hundreds of millions data series from DBnomics API (). ...
Download / Learn more Package Citations See dependency  
mistral  
Methods in Structural Reliability
Various reliability analysis methods for rare event inference (computing failure probability and qua ...
Download / Learn more Package Citations See dependency  
steepness  
Testing Steepness of Dominance Hierarchies
The steepness package computes steepness as a property of dominance hierarchies. Steepness is define ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
ftaproxim  
Fault Tree Analysis Based on Proxel Simulation
Calculation and plotting of instantaneous unavailabilities of basic events along with the top event ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns