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ggroups  

Pedigree and Genetic Groups
View on CRAN: Click here


Download and install ggroups package within the R console
Install from CRAN:
install.packages("ggroups")

Install from Github:
library("remotes")
install_github("cran/ggroups")

Install by package version:
library("remotes")
install_version("ggroups", "2.1.2")



Attach the package and use:
library("ggroups")
Maintained by
Mohammad Ali Nilforooshan
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-03-31
Latest Update: 2022-03-27
Description:
Calculates additive and dominance genetic relationship matrices and their inverses, in matrix and tabular-sparse formats. It includes functions for checking and processing pedigree, calculating inbreeding coefficients (Meuwissen & Luo, 1992 ), as well as functions to calculate the matrix of genetic group contributions (Q), and adding those contributions to the genetic merit of animals (Quaas (1988) ). Calculation of Q is computationally extensive. There are computationally optimized functions to calculate Q.
How to cite:
Mohammad Ali Nilforooshan (2019). ggroups: Pedigree and Genetic Groups. R package version 2.1.2, https://cran.r-project.org/web/packages/ggroups
Previous versions and publish date:
1.1.4 (2019-03-31 13:00), 1.2.0 (2019-04-14 01:02), 1.2.1 (2019-05-11 01:00), 1.3.0 (2020-02-09 20:30), 2.0.1 (2020-02-18 10:40), 2.0.2 (2020-02-28 12:30), 2.0.3 (2020-03-19 07:50), 2.1.0 (2021-01-06 11:50), 2.1.1 (2021-11-03 06:10)
Other packages that cited ggroups R package
View ggroups citation profile
Other R packages that ggroups depends, imports, suggests or enhances
Functions, R codes and Examples using the ggroups R package
Some associated functions: Qgpu . buildA . buildD . gghead . ggroups-package . inb . inbreed . mat2tab . offspring . pedcheck . peddown . pedup . pruneped . qmat . qmatL . qmatXL . renum . rg . smgsped . tab2mat . tabA . tabAinv . tabD . tabDinv . 
Some associated R codes: Arow1.R . Qgpu.R . buildA.R . buildD.R . gghead.R . ggroups.R . inb.R . inbreed.R . mat2tab.R . offspring.R . pedcheck.R . peddown.R . pedup.R . pruneped.R . qmat.R . qmatL.R . qmatXL.R . renum.R . rg.R . smgsped.R . tab2mat.R . tabA.R . tabAinv.R . tabD.R . tabDinv.R .  Full ggroups package functions and examples
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