Other packages > Find by keyword >

ggmix  

Variable Selection in Linear Mixed Models for SNP Data
View on CRAN: Click here


Download and install ggmix package within the R console
Install from CRAN:
install.packages("ggmix")

Install from Github:
library("remotes")
install_github("cran/ggmix")

Install by package version:
library("remotes")
install_version("ggmix", "0.0.2")



Attach the package and use:
library("ggmix")
Maintained by
Sahir Bhatnagar
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-03-20
Latest Update: 2021-04-13
Description:
Fit penalized multivariable linear mixed models with a single random effect to control for population structure in genetic association studies. The goal is to simultaneously fit many genetic variants at the same time, in order to select markers that are independently associated with the response. Can also handle prior annotation information, for example, rare variants, in the form of variable weights. For more information, see the website below and the accompanying paper: Bhatnagar et al., "Simultaneous SNP selection and adjustment for population structure in high dimensional prediction models", 2020, .
How to cite:
Sahir Bhatnagar (2020). ggmix: Variable Selection in Linear Mixed Models for SNP Data. R package version 0.0.2, https://cran.r-project.org/web/packages/ggmix. Accessed 09 Mar. 2026.
Previous versions and publish date:
0.0.1 (2020-03-20 14:00)
Other packages that cited ggmix R package
View ggmix citation profile
Other R packages that ggmix depends, imports, suggests or enhances
Complete documentation for ggmix
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

pooling  
Fit Poolwise Regression Models
Functions for calculating power and fitting regression models in studies where a biomarker is measur ...
Download / Learn more Package Citations See dependency  
rzentra  
Client for the 'ZENTRA Cloud' API
Provides functionality to read settings, statuses and readings of weather stations from the 'ZENTRA ...
Download / Learn more Package Citations See dependency  
ggblanket  
Simplify 'ggplot2' Visualisation
Simplify 'ggplot2' visualisation with 'ggblanket' wrapper functions. ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
Rgb  
The R Genome Browser
Classes and methods to efficiently handle (slice, annotate, draw ...) genomic features (such as gene ...
Download / Learn more Package Citations See dependency  

26,293

R Packages

225,784

Dependencies

70,376

Author Associations

26,294

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA