Other packages > Find by keyword >

ggmix  

Variable Selection in Linear Mixed Models for SNP Data
View on CRAN: Click here


Download and install ggmix package within the R console
Install from CRAN:
install.packages("ggmix")

Install from Github:
library("remotes")
install_github("cran/ggmix")

Install by package version:
library("remotes")
install_version("ggmix", "0.0.2")



Attach the package and use:
library("ggmix")
Maintained by
Sahir Bhatnagar
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-03-20
Latest Update: 2021-04-13
Description:
Fit penalized multivariable linear mixed models with a single random effect to control for population structure in genetic association studies. The goal is to simultaneously fit many genetic variants at the same time, in order to select markers that are independently associated with the response. Can also handle prior annotation information, for example, rare variants, in the form of variable weights. For more information, see the website below and the accompanying paper: Bhatnagar et al., "Simultaneous SNP selection and adjustment for population structure in high dimensional prediction models", 2020, .
How to cite:
Sahir Bhatnagar (2020). ggmix: Variable Selection in Linear Mixed Models for SNP Data. R package version 0.0.2, https://cran.r-project.org/web/packages/ggmix. Accessed 25 Jun. 2026.
Previous versions and publish date:
0.0.1 (2020-03-20 14:00)
Other packages that cited ggmix R package
View ggmix citation profile
Other R packages that ggmix depends, imports, suggests or enhances
Complete documentation for ggmix
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
foster  
Forest Structure Extrapolation with R
Set of tools to streamline the modeling of the relationship betweensatellite imagery time series or ...
Download / Learn more Package Citations See dependency  
sitmo  
Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
Provided within are two high quality and fast PPRNGs that may be used in an 'OpenMP' parallel enviro ...
Download / Learn more Package Citations See dependency  
edeaR  
Exploratory and Descriptive Event-Based Data Analysis
Exploratory and descriptive analysis of event based data. Provides methods for describing and select ...
Download / Learn more Package Citations See dependency  
airGRiwrm  
'airGR' Integrated Water Resource Management
Semi-distributed Precipitation-Runoff Modelling based on 'airGR' package models integrating human i ...
Download / Learn more Package Citations See dependency  

27,535

R Packages

236,180

Dependencies

73,223

Author Associations

27,536

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA