Other packages > Find by keyword >

ggPMX  

'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME Models
View on CRAN: Click here


Download and install ggPMX package within the R console
Install from CRAN:
install.packages("ggPMX")

Install from Github:
library("remotes")
install_github("cran/ggPMX")

Install by package version:
library("remotes")
install_version("ggPMX", "1.3.2")



Attach the package and use:
library("ggPMX")
Maintained by
Matthew Fidler
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-05-16
Latest Update: 2025-08-25
Description:
At Novartis, we aimed at standardizing the set of diagnostic plots used for modeling activities in order to reduce the overall effort required for generating such plots. For this, we developed a guidance that proposes an adequate set of diagnostics and a toolbox, called 'ggPMX' to execute them. 'ggPMX' is a toolbox that can generate all diagnostic plots at a quality sufficient for publication and submissions using few lines of code. This package focuses on plots recommended by ISoP . While not required, you can get/install the 'R' 'lixoftConnectors' package in the 'Monolix' installation, as described at the following url . When 'lixoftConnectors' is available, 'R' can use 'Monolix' directly to create the required Chart Data instead of exporting it from the 'Monolix' gui.
How to cite:
Matthew Fidler (2019). ggPMX: 'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME Models. R package version 1.3.2, https://cran.r-project.org/web/packages/ggPMX. Accessed 04 Aug. 2026.
Previous versions and publish date:
(2026-07-09 07:43), 0.9.1 (2019-05-16 13:10), 0.9.2 (2019-05-17 15:40), 0.9.3 (2019-05-26 17:10), 0.9.4 (2019-06-06 14:00), 0.9.6 (2019-10-27 21:30), 0.9.7 (2019-11-18 06:50), 0.9.8 (2019-11-19 11:30), 1.0 (2020-01-12 13:10), 1.1.1 (2020-05-15 01:50), 1.1.2 (2020-06-25 17:50), 1.1 (2020-04-09 14:50), 1.2.1 (2021-05-25 18:00), 1.2.2 (2021-05-28 11:30), 1.2.3 (2021-05-29 18:50), 1.2.4 (2021-09-20 18:30), 1.2.5 (2022-01-15 17:22), 1.2.6 (2022-02-01 19:50), 1.2.7 (2022-06-10 01:00), 1.2.8 (2022-06-18 01:10), 1.2.9 (2023-06-01 11:10), 1.2.10 (2023-06-17 01:20), 1.2.11 (2023-11-30 17:10), 1.3.0 (2025-07-16 12:20), 1.3.1 (2025-08-27 11:10)
Other packages that cited ggPMX R package
View ggPMX citation profile
Other R packages that ggPMX depends, imports, suggests or enhances
Complete documentation for ggPMX
Functions, R codes and Examples using the ggPMX R package
Some associated functions: abbrev . add_draft . check_shrink . distrib . eta_cov . eta_cov_plot . eta_distribution_plot . eta_pairs . eval_sym_parent_env . getPmxOption . get_abbrev . get_cats . get_conts . get_covariates . get_data . get_occ . get_plot . get_plot_config . get_strats . ggPMX . gtable_remove_grobs . individual . input_finegrid . is.pmx_gpar . l_left_join . load_config . load_data_set . load_source . n_pages . param_table . parse_mlxtran . pk_occ . pk_pd . plot_names . plot_pmx.distrib . plot_pmx.eta_cov . plot_pmx.eta_pairs . plot_pmx.individual . plot_pmx . plot_pmx.pmx_dens . plot_pmx.pmx_gpar . plot_pmx.pmx_qq . plot_pmx.residual . plot_shrink . plots . pmx . pmxOptions . pmx_bloq . pmx_combine_tables . pmx_comp_shrink . pmx_config . pmx_copy . pmx_cov . pmx_dens . pmx_endpoint . pmx_file_path . pmx_filter . pmx_get_configs . pmx_get_extension . pmx_gpar . pmx_index_table . pmx_is.nm.table.list . pmx_list_nm_tables . pmx_list_nm_tables_manual . pmx_make_extension . pmx_manual_nm_import . pmx_merge_firstonly . pmx_msg . pmx_nlmixr . pmx_nm . pmx_parse_nm_files . pmx_plot . pmx_plot_cats . pmx_plot_eta_matrix . pmx_plot_individual . pmx_plot_iwres_dens . pmx_plot_vpc . pmx_qq . pmx_qq_plot . pmx_raw_to_tibble . pmx_read_args . pmx_read_funs . pmx_read_nm_files . pmx_read_nm_model . pmx_read_nm_tables . pmx_register_plot . pmx_report . pmx_report_template . pmx_settings . pmx_shrink . pmx_sim . pmx_theme . pmx_tidyr_new_interface . pmx_update . pmx_update_extension . pmx_vpc . pmx_vpc_bin . pmx_vpc_ci . pmx_vpc_obs . pmx_vpc_pi . pmx_vpc_rug . print.abbreviation . print.configs . print.pmxClass . print.pmxConfig . print.pmx_gpar . read_extfile . read_input . read_mlx_ind_est . read_mlx_par_est . read_mlx_pred . reexports . residual . residual_scatter . set_abbrev . set_data . set_plot . sub-.pmx_gpar . theophylline . wrap_formula . 
Some associated R codes: assertions.R . classInt.R . config.R . generics.R . ggPMX-options.R . ggPMX-package.R . ggforce-facet-paginate.R . gpar.R . nlmixr.R . nonmem_reader.R . param_table.R . plot-base.R . plot-density.R . plot-distribution.R . plot-eta-cov.R . plot-eta-pairs.R . plot-individual.R . plot-qq.R . plot-residual.R . plot-themes.R . plot-vpc.R . pmx-add-plot.R . pmx-all-compute.R . pmx-all-plots.R . pmx-data.R . pmx-filter.R . pmx-plots-density.R . pmx-plots-distibution.R . pmx-plots-eta-cov.R . pmx-plots-individual.R . pmx-plots-matrix.R . pmx-plots-quantile.R . pmx-plots-scatter.R . pmx-plots-vpc.R . pmx-post_load.R . pmx-reader.R . pmx-report.R . pmxClass.R . pmx_list_nm_tables.R . pmx_manual_import.R . pmx_read_nm_files.R . pmx_read_nm_model.R . pmx_read_nm_tables.R . pmx_utils_nonmem_reader.R . read_extfile.R . utils.R . zzz.R .  Full ggPMX package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

epigraphdb  
Interface Package for the 'EpiGraphDB' Platform
The interface package to access data from the 'EpiGraphDB' platform. It p ...
Download / Learn more Package Citations See dependency  
Maintainer: Yi Liu (view profile)
ggconf  
Simpler Appearance Modification of "ggplot2"
A flexible interface for ggplot2theme potentially saving 50 of your typing. ...
Download / Learn more Package Citations See dependency  
GLMMadaptive  
Generalized Linear Mixed Models using Adaptive Gaussian Quadrature
Fits generalized linear mixed models for a single grouping factor under maximum likelihood approxim ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
sValues  
Measures of Sturdiness of Regression Coefficients
Implements the s-values proposed by Ed. Leamer. It provides a context-minimal approach for sensitivi ...
Download / Learn more Package Citations See dependency  
rCMA  
R-to-Java Interface for 'CMA-ES'
Tool for providing access to the Java version 'CMAEvolutionStrategy' of Nikolaus Hansen. 'CMA-ES' i ...
Download / Learn more Package Citations See dependency  

28,083

R Packages

239,283

Dependencies

74,457

Author Associations

28,084

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA