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fitPoly  

Genotype Calling for Bi-Allelic Marker Assays
View on CRAN: Click here


Download and install fitPoly package within the R console
Install from CRAN:
install.packages("fitPoly")

Install from Github:
library("remotes")
install_github("cran/fitPoly")

Install by package version:
library("remotes")
install_version("fitPoly", "3.0.0")



Attach the package and use:
library("fitPoly")
Maintained by
Roeland E. Voorrips
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-03-16
Latest Update: 2018-03-16
Description:
Genotyping assays for bi-allelic markers (e.g. SNPs) produce signal intensities for the two alleles. 'fitPoly' assigns genotypes (allele dosages) to a collection of polyploid samples based on these signal intensities. 'fitPoly' replaces the older package 'fitTetra' that was limited (a.o.) to only tetraploid populations whereas 'fitPoly' accepts any ploidy level. Reference: Voorrips RE, Gort G, Vosman B (2011) .
How to cite:
Roeland E. Voorrips (2018). fitPoly: Genotype Calling for Bi-Allelic Marker Assays. R package version 3.0.0, https://cran.r-project.org/web/packages/fitPoly. Accessed 22 Dec. 2024.
Previous versions and publish date:
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Other packages that cited fitPoly R package
View fitPoly citation profile
Other R packages that fitPoly depends, imports, suggests or enhances
Complete documentation for fitPoly
Functions, R codes and Examples using the fitPoly R package
Some associated functions: CodomMarker . convertStartmeans . fitOneMarker . fitPoly . fitPoly_data . saveMarkerModels . 
Some associated R codes: Full fitPoly package functions and examples
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