Other packages > Find by keyword >

easyDifferentialGeneCoexpression  

Easily Performs Differential Coexpression Analysis
View on CRAN: Click here


Download and install easyDifferentialGeneCoexpression package within the R console
Install from CRAN:
install.packages("easyDifferentialGeneCoexpression")

Install from Github:
library("remotes")
install_github("cran/easyDifferentialGeneCoexpression")

Install by package version:
library("remotes")
install_version("easyDifferentialGeneCoexpression", "1.4")



Attach the package and use:
library("easyDifferentialGeneCoexpression")
Maintained by
Davide Chicco
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-12-02
Latest Update:
Description:
A function that reads in the GEO code of a list of probesets or gene symbols, a gene expression dataset GEO accession code, the name of the dataset feature discriminating the two conditions for the differential coexpression, and the values of the two different conditions for the differential coexpression, and returns the significant pairs of genes/probesets with highest differential coexpression (p-value < 0.005). If the input gene list is made of gene symbols, this package associates the probesets to these gene symbols, if found. Platforms available: GPL80, GPL8300, GPL80, GPL96, GPL570, GPL571, GPL20115, GPL1293, GPL6102, GPL6104, GPL6883, GPL6884, GPL13497, GPL14550, GPL17077, GPL6480. GEO: Gene Expression Omnibus. ID: identifier code. The GEO datasets are downloaded from the URL .
How to cite:
Davide Chicco (2021). easyDifferentialGeneCoexpression: Easily Performs Differential Coexpression Analysis. R package version 1.4, https://cran.r-project.org/web/packages/easyDifferentialGeneCoexpression. Accessed 16 Jul. 2026.
Previous versions and publish date:
(2026-07-09 07:34), 0.7 (2021-12-02 09:30), 0.8 (2021-12-03 23:50), 0.9 (2021-12-09 00:00), 1.0 (2022-02-16 21:20), 1.4 (2024-02-05 12:40)
Other packages that cited easyDifferentialGeneCoexpression R package
View easyDifferentialGeneCoexpression citation profile
Other R packages that easyDifferentialGeneCoexpression depends, imports, suggests or enhances
Complete documentation for easyDifferentialGeneCoexpression
Functions, R codes and Examples using the easyDifferentialGeneCoexpression R package
Some associated functions: easyDifferentialGeneCoexpression . fromProbesetToGeneSymbol . geoDataDownload . geoPlatformAnnotationsDownload . probesetRetrieval . 
Some associated R codes: Full easyDifferentialGeneCoexpression package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

stevedata  
Steve's Toy Data for Teaching About a Variety of Methodological, Social, and Political Topics
This is a collection of various kinds of data with broad uses for teaching. My students, and academ ...
Download / Learn more Package Citations See dependency  
tarchetypes  
Archetypes for Targets
Function-oriented Make-like declarative pipelines for Statistics and data science are supported in t ...
Download / Learn more Package Citations See dependency  
Rnmr1D  
Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra
Perform the complete processing of a set of proton nuclear magnetic resonance spectra from the free ...
Download / Learn more Package Citations See dependency  
bbdetection  
Identification of Bull and Bear States of the Market
Implements two algorithms of detecting Bull and Bear markets in stock prices: the algorithm of Pagan ...
Download / Learn more Package Citations See dependency  
schoolmath  
Functions and Datasets for Math Used in School
Contains functions and datasets for math taught in school. A main focus is set to prime-calculation. ...
Download / Learn more Package Citations See dependency  
tibble  
Simple Data Frames
Provides a 'tbl_df' class (the 'tibble') with stricter checking and better formatting than the tradi ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA