Other packages > Find by keyword >

easyDifferentialGeneCoexpression  

Easily Performs Differential Coexpression Analysis
View on CRAN: Click here


Download and install easyDifferentialGeneCoexpression package within the R console
Install from CRAN:
install.packages("easyDifferentialGeneCoexpression")

Install from Github:
library("remotes")
install_github("cran/easyDifferentialGeneCoexpression")

Install by package version:
library("remotes")
install_version("easyDifferentialGeneCoexpression", "1.4")



Attach the package and use:
library("easyDifferentialGeneCoexpression")
Maintained by
Davide Chicco
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-12-02
Latest Update:
Description:
A function that reads in the GEO code of a list of probesets or gene symbols, a gene expression dataset GEO accession code, the name of the dataset feature discriminating the two conditions for the differential coexpression, and the values of the two different conditions for the differential coexpression, and returns the significant pairs of genes/probesets with highest differential coexpression (p-value < 0.005). If the input gene list is made of gene symbols, this package associates the probesets to these gene symbols, if found. Platforms available: GPL80, GPL8300, GPL80, GPL96, GPL570, GPL571, GPL20115, GPL1293, GPL6102, GPL6104, GPL6883, GPL6884, GPL13497, GPL14550, GPL17077, GPL6480. GEO: Gene Expression Omnibus. ID: identifier code. The GEO datasets are downloaded from the URL .
How to cite:
Davide Chicco (2021). easyDifferentialGeneCoexpression: Easily Performs Differential Coexpression Analysis. R package version 1.4, https://cran.r-project.org/web/packages/easyDifferentialGeneCoexpression. Accessed 06 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:34), 0.7 (2021-12-02 09:30), 0.8 (2021-12-03 23:50), 0.9 (2021-12-09 00:00), 1.0 (2022-02-16 21:20), 1.4 (2024-02-05 12:40)
Other packages that cited easyDifferentialGeneCoexpression R package
View easyDifferentialGeneCoexpression citation profile
Other R packages that easyDifferentialGeneCoexpression depends, imports, suggests or enhances
Complete documentation for easyDifferentialGeneCoexpression
Functions, R codes and Examples using the easyDifferentialGeneCoexpression R package
Some associated functions: easyDifferentialGeneCoexpression . fromProbesetToGeneSymbol . geoDataDownload . geoPlatformAnnotationsDownload . probesetRetrieval . 
Some associated R codes: Full easyDifferentialGeneCoexpression package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

gecko  
Geographical Ecology and Conservation Knowledge Online
Includes a collection of geographical analysis functions aimed primarily at ecology and conservation ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
gRim  
Graphical Interaction Models
Provides the following types of models: Models for contingency tables (i.e. log-linear models) Grap ...
Download / Learn more Package Citations See dependency  

28,905

R Packages

247,686

Dependencies

76,495

Author Associations

28,906

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA