Other packages > Find by keyword >

easyDifferentialGeneCoexpression  

Easily Performs Differential Coexpression Analysis
View on CRAN: Click here


Download and install easyDifferentialGeneCoexpression package within the R console
Install from CRAN:
install.packages("easyDifferentialGeneCoexpression")

Install from Github:
library("remotes")
install_github("cran/easyDifferentialGeneCoexpression")

Install by package version:
library("remotes")
install_version("easyDifferentialGeneCoexpression", "1.4")



Attach the package and use:
library("easyDifferentialGeneCoexpression")
Maintained by
Davide Chicco
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-12-02
Latest Update:
Description:
A function that reads in the GEO code of a list of probesets or gene symbols, a gene expression dataset GEO accession code, the name of the dataset feature discriminating the two conditions for the differential coexpression, and the values of the two different conditions for the differential coexpression, and returns the significant pairs of genes/probesets with highest differential coexpression (p-value < 0.005). If the input gene list is made of gene symbols, this package associates the probesets to these gene symbols, if found. Platforms available: GPL80, GPL8300, GPL80, GPL96, GPL570, GPL571, GPL20115, GPL1293, GPL6102, GPL6104, GPL6883, GPL6884, GPL13497, GPL14550, GPL17077, GPL6480. GEO: Gene Expression Omnibus. ID: identifier code. The GEO datasets are downloaded from the URL .
How to cite:
Davide Chicco (2021). easyDifferentialGeneCoexpression: Easily Performs Differential Coexpression Analysis. R package version 1.4, https://cran.r-project.org/web/packages/easyDifferentialGeneCoexpression. Accessed 27 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:34), 0.7 (2021-12-02 09:30), 0.8 (2021-12-03 23:50), 0.9 (2021-12-09 00:00), 1.0 (2022-02-16 21:20), 1.4 (2024-02-05 12:40)
Other packages that cited easyDifferentialGeneCoexpression R package
View easyDifferentialGeneCoexpression citation profile
Other R packages that easyDifferentialGeneCoexpression depends, imports, suggests or enhances
Complete documentation for easyDifferentialGeneCoexpression
Functions, R codes and Examples using the easyDifferentialGeneCoexpression R package
Some associated functions: easyDifferentialGeneCoexpression . fromProbesetToGeneSymbol . geoDataDownload . geoPlatformAnnotationsDownload . probesetRetrieval . 
Some associated R codes: Full easyDifferentialGeneCoexpression package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

exams2learnr  
Interface for 'exams' Exercises in 'learnr' Tutorials
Automatic generation of quizzes or individual questions for 'learnr' tutorials based on 'R/exams' ex ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
usemodels  
Boilerplate Code for 'Tidymodels' Analyses
Code snippets to fit models using the tidymodels framework can be easily created for a given data se ...
Download / Learn more Package Citations See dependency  
spanish  
Translate Quantities from Strings to Integer and Back. Misc Functions on Spanish Data
Character vector to numerical translation in Euros from Spanish spelled monetary quantities. Reverse ...
Download / Learn more Package Citations See dependency  
SGB  
Simplicial Generalized Beta Regression
Main properties and regression procedures using a generalization of the Dirichlet distribution calle ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA