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eHDPrep  

Quality Control and Semantic Enrichment of Datasets
View on CRAN: Click here


Download and install eHDPrep package within the R console
Install from CRAN:
install.packages("eHDPrep")

Install from Github:
library("remotes")
install_github("cran/eHDPrep")

Install by package version:
library("remotes")
install_version("eHDPrep", "1.3.3")



Attach the package and use:
library("eHDPrep")
Maintained by
Ian Overton
[Scholar Profile | Author Map]
First Published: 2022-09-07
Latest Update: 2023-06-05
Description:
A tool for the preparation and enrichment of health datasets for analysis (Toner et al. (2023) ). Provides functionality for assessing data quality and for improving the reliability and machine interpretability of a dataset. 'eHDPrep' also enables semantic enrichment of a dataset where metavariables are discovered from the relationships between input variables determined from user-provided ontologies.
How to cite:
Ian Overton (2022). eHDPrep: Quality Control and Semantic Enrichment of Datasets. R package version 1.3.3, https://cran.r-project.org/web/packages/eHDPrep. Accessed 04 Apr. 2025.
Previous versions and publish date:
1.2.1 (2022-09-07 09:50), 1.3.2 (2023-02-01 18:20)
Other packages that cited eHDPrep R package
View eHDPrep citation profile
Other R packages that eHDPrep depends, imports, suggests or enhances
Complete documentation for eHDPrep
Functions, R codes and Examples using the eHDPrep R package
Some associated functions: apply_quality_ctrl . assess_completeness . assess_quality . assume_var_classes . cellspec_lgl . compare_completeness . compare_info_content . compare_info_content_plt . completeness_heatmap . count_compare . discrete.mi . distant_neg_val . eHDPrep-package . edge_tbl_to_graph . encode_as_num_mat . encode_bin_cat_vec . encode_binary_cats . encode_cats . encode_genotype_vec . encode_genotypes . encode_ordinals . entropy . exact.kde . example_data . example_edge_tbl . example_mapping_file . example_ontology . export_dataset . extract_freetext . geometric.mean . identify_inconsistency . import_dataset . import_var_classes . information_content_contin . information_content_discrete . join_vars_to_ontol . max_catchNAs . mean_catchNAs . merge_cols . metavariable_agg . metavariable_info . metavariable_variable_descendants . mi_content_discrete . min_catchNAs . mod_track . node_IC_zhou . normalize . nums_to_NA . onehot_vec . ordinal_label_levels . plot_completeness . prod_catchNAs . report_var_mods . review_quality_ctrl . row_completeness . semantic_enrichment . skipgram_append . skipgram_freq . skipgram_identify . strings_to_NA . sum_catchNAs . validate_consistency_tbl . validate_mapping_tbl . validate_ontol_nw . variable.bw.kde . variable_completeness . variable_entropy . warn_missing_dots . zero_entropy_variables . 
Some associated R codes: QC_clean.R . QC_completeness.R . QC_freetext.R . QC_info_theory.R . QC_review.R . data.R . eHDPrep-package.R . high_level.R . import_export.R . internal_consist.R . merge_vars.R . rTMA_import.R . semantic_enrich.R .  Full eHDPrep package functions and examples
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