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dbparser  

Drugs Databases Parser
View on CRAN: Click here


Download and install dbparser package within the R console
Install from CRAN:
install.packages("dbparser")

Install from Github:
library("remotes")
install_github("cran/dbparser")

Install by package version:
library("remotes")
install_version("dbparser", "2.0.3")



Attach the package and use:
library("dbparser")
Maintained by
Mohammed Ali
[Scholar Profile | Author Map]
First Published: 2018-12-18
Latest Update: 2023-03-27
Description:
This tool is for parsing public drug databases such as 'DrugBank' XML database . The parsed data are then returned in a proper 'R' object called 'dvobject'.
How to cite:
Mohammed Ali (2018). dbparser: Drugs Databases Parser. R package version 2.0.3, https://cran.r-project.org/web/packages/dbparser. Accessed 29 Mar. 2025.
Previous versions and publish date:
1.0.0 (2018-12-18 00:40), 1.0.1 (2019-04-16 10:22), 1.0.2 (2019-07-08 18:10), 1.0.3 (2019-07-12 00:22), 1.0.4 (2019-08-28 22:50), 1.1.0 (2020-02-21 06:40), 1.1.1 (2020-05-10 15:50), 1.1.2 (2020-06-08 19:00), 1.2.0 (2020-08-26 14:10), 2.0.0 (2023-03-17 09:30), 2.0.1 (2023-03-27 09:30), 2.0.2 (2024-02-16 18:10)
Other packages that cited dbparser R package
View dbparser citation profile
Other R packages that dbparser depends, imports, suggests or enhances
Complete documentation for dbparser
Functions, R codes and Examples using the dbparser R package
Some associated functions: add_drugbank_info . articles . attachments . books . cett_actions_doc . cett_doc . cett_ex_identity_doc . cett_go_doc . cett_nodes_options . cett_poly_doc . cett_poly_pfms_doc . cett_poly_syn_doc . dbparser . drug_affected_organisms . drug_ahfs_codes . drug_atc_codes . drug_calc_prop . drug_categories . drug_classification . drug_dosages . drug_ex_identity . drug_exp_prop . drug_external_links . drug_food_interactions . drug_general_information . drug_groups . drug_interactions . drug_intern_brand . drug_manufacturers . drug_mixtures . drug_node_options . drug_packagers . drug_patents . drug_pathway . drug_pathway_drugs . drug_pathway_enzyme . drug_pdb_entries . drug_pharmacology . drug_prices . drug_products . drug_reactions . drug_reactions_enzymes . drug_salts . drug_sequences . drug_snp_adverse_reactions . drug_snp_effects . drug_syn . init_dvobject . links . parseDrugBank . parse_cett_node . parse_drug_nodes . parse_references_node . read_drugbank_xml_db . references_node_options . show_dvobject_metadata . 
Some associated R codes: abstract_parser.R . cett_actions_parsers.R . cett_general_information_parsers.R . cett_polypeptide_general_infromation_parsers.R . cett_polypeptide_others_parsers.R . dbparser.R . drug_atc_codes_node_parser.R . drug_classfication_node_parser.R . drug_common_utilities.R . drug_main_node_parser.R . drug_manufacturer_node_parser.R . drug_parsers.R . drug_pathway_node_parsers.R . drug_pharmacology_parser.R . drug_price_node_parser.R . drug_reaction_node_parser.R . drug_sequence_node_parser.R . drug_synonym_node_parser.R . drugbank_parser.R . dvobject_metadata.R . imports.R . references_parsers.R .  Full dbparser package functions and examples
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