Other packages > Find by keyword >

cosmicsig  

Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer)
View on CRAN: Click here


Download and install cosmicsig package within the R console
Install from CRAN:
install.packages("cosmicsig")

Install from Github:
library("remotes")
install_github("cran/cosmicsig")

Install by package version:
library("remotes")
install_version("cosmicsig", "1.3.1")



Attach the package and use:
library("cosmicsig")
Maintained by
Steven Rozen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-12-20
Latest Update: 2023-08-30
Description:
A data package with 2 main package variables: 'signature' and 'etiology'. The 'signature' variable contains the latest mutational signature profiles released on COSMIC for 3 mutation types: * Single base substitutions in the context of preceding and following bases, * Doublet base substitutions, and * Small insertions and deletions. The 'etiology' variable provides the known or hypothesized causes of signatures. 'cosmicsig' stands for COSMIC signatures. Please run ?'cosmicsig' for more information.
How to cite:
Steven Rozen (2021). cosmicsig: Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer). R package version 1.3.1, https://cran.r-project.org/web/packages/cosmicsig. Accessed 26 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:28), 1.0.7 (2021-12-20 10:50), 1.1.1 (2023-08-30 10:20)
Other packages that cited cosmicsig R package
View cosmicsig citation profile
Other R packages that cosmicsig depends, imports, suggests or enhances
Complete documentation for cosmicsig
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

SADEG  
Stability Analysis in Differentially Expressed Genes
We analyzed the nucleotide composition of genes with a special emphasis on stability of DNA sequence ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
MARSS  
Multivariate Autoregressive State-Space Modeling
The MARSS package provides maximum-likelihood parameter estimation for constrained and unconstraine ...
Download / Learn more Package Citations See dependency  
rts2  
Log-Gaussian Cox Process Models with Approximations
Supports modelling real-time case data to facilitate the real-time surveillance of infectious disea ...
Download / Learn more Package Citations See dependency  
LSDsensitivity  
Sensitivity Analysis Tools for 'LSD' Simulations
Tools for sensitivity analysis of LSD simulation models. Reads object-oriented data produced by LSD ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA