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cosmicsig
View on CRAN: Click
here
Download and install cosmicsig package within the R console
Install from CRAN:
install.packages("cosmicsig")
Install from Github:
library("remotes")
install_github("cran/cosmicsig")
Install by package version:
library("remotes")
install_version("cosmicsig", "1.1.1")
Attach the package and use:
library("cosmicsig")
Maintained by
Steven Rozen
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.cosmicsig . https://github.com/Rozen-Lab/cosmicsig/issues . https://github.com/Rozen-Lab/cosmicsig . cosmicsig citation info . cosmicsig results . cosmicsig.pdf . cosmicsig_1.1.1.tar.gz . cosmicsig_1.1.1.zip . cosmicsig_1.1.1.zip . cosmicsig_1.1.1.zip . cosmicsig_1.1.1.tgz . cosmicsig_1.1.1.tgz . cosmicsig_1.1.1.tgz . cosmicsig_1.1.1.tgz . cosmicsig_1.1.1.tgz . cosmicsig_1.1.1.tgz . cosmicsig archive . https://CRAN.R-project.org/package=cosmicsig .
First Published: 2021-12-20
Latest Update: 2023-08-30
Description:
A data package with 2 main package variables: 'signature' and 'etiology'.
The 'signature' variable contains the latest mutational signature profiles
released on COSMIC for 3 mutation
types:
* Single base substitutions in the context of preceding and following bases,
* Doublet base substitutions, and
* Small insertions and deletions.
The 'etiology' variable provides the known or hypothesized causes of signatures.
'cosmicsig' stands for COSMIC signatures. Please run ?'cosmicsig' for more
information.
How to cite:
Steven Rozen (2021). cosmicsig: Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer). R package version 1.1.1, https://cran.r-project.org/web/packages/cosmicsig. Accessed 07 Apr. 2025.
Previous versions and publish date:
1.0.7 (2021-12-20 10:50)
Other packages that cited cosmicsig R package
View cosmicsig citation profile
Other R packages that cosmicsig depends,
imports, suggests or enhances
Complete documentation for cosmicsig
Functions, R codes and Examples using
the cosmicsig R package
Some associated functions: COSMIC_v3.0 . COSMIC_v3.1 . COSMIC_v3.2 . COSMIC_v3.3 . SBS96_ID_to_SBS192_ID . cosmicsig . etiology . get_etiology . possible_artifacts . rare_signatures . signature .
Some associated R codes: COSMIC_v3.0.R . COSMIC_v3.1.R . COSMIC_v3.2.R . COSMIC_v3.3.R . SBS96_ID_to_SBS192_ID.R . cosmicsig.R . etiology.R . get_etiology.R . possible_artifacts.R . rare_signatures.R . signature.R . Full cosmicsig package functions and examples
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