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cosmicsig  

Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer)
View on CRAN: Click here


Download and install cosmicsig package within the R console
Install from CRAN:
install.packages("cosmicsig")

Install from Github:
library("remotes")
install_github("cran/cosmicsig")

Install by package version:
library("remotes")
install_version("cosmicsig", "1.1.1")



Attach the package and use:
library("cosmicsig")
Maintained by
Steven Rozen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-12-20
Latest Update: 2023-08-30
Description:
A data package with 2 main package variables: 'signature' and 'etiology'. The 'signature' variable contains the latest mutational signature profiles released on COSMIC for 3 mutation types: * Single base substitutions in the context of preceding and following bases, * Doublet base substitutions, and * Small insertions and deletions. The 'etiology' variable provides the known or hypothesized causes of signatures. 'cosmicsig' stands for COSMIC signatures. Please run ?'cosmicsig' for more information.
How to cite:
Steven Rozen (2021). cosmicsig: Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer). R package version 1.1.1, https://cran.r-project.org/web/packages/cosmicsig. Accessed 22 Dec. 2024.
Previous versions and publish date:
1.0.7 (2021-12-20 10:50)
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