Other packages > Find by keyword >

archiDART  

Plant Root System Architecture Analysis Using DART and RSML Files
View on CRAN: Click here


Download and install archiDART package within the R console
Install from CRAN:
install.packages("archiDART")

Install from Github:
library("remotes")
install_github("cran/archiDART")

Install by package version:
library("remotes")
install_version("archiDART", "3.4")



Attach the package and use:
library("archiDART")
Maintained by
Benjamin M Delory
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-12-05
Latest Update: 2021-02-11
Description:
Analysis of complex plant root system architectures (RSA) using the output files created by Data Analysis of Root Tracings (DART), an open-access software dedicated to the study of plant root architecture and development across time series (Le Bot et al (2010) "DART: a software to analyse root system architecture and development from captured images", Plant and Soil, ), and RSA data encoded with the Root System Markup Language (RSML) (Lobet et al (2015) "Root System Markup Language: toward a unified root architecture description language", Plant Physiology, ). More information can be found in Delory et al (2016) "archiDART: an R package for the automated computation of plant root architectural traits", Plant and Soil, .
How to cite:
Benjamin M Delory (2014). archiDART: Plant Root System Architecture Analysis Using DART and RSML Files. R package version 3.4, https://cran.r-project.org/web/packages/archiDART. Accessed 15 Jul. 2026.
Previous versions and publish date:
(2026-07-09 07:18), 1.0 (2014-12-05 11:00), 1.1 (2015-06-08 20:25), 1.2 (2015-12-22 15:43), 1.3 (2016-03-06 23:20), 1.4 (2016-03-08 00:11), 2.0 (2017-05-11 09:40), 3.0 (2017-12-21 13:45), 3.2 (2018-04-03 23:34), 3.3 (2019-12-16 17:20)
Other packages that cited archiDART R package
View archiDART citation profile
Other R packages that archiDART depends, imports, suggests or enhances
Complete documentation for archiDART
Functions, R codes and Examples using the archiDART R package
Some associated functions: archidraw . archigrow . architect . bottleneckdist . dartToTable . latdist . perhomology . plot.barcode . root . rsmlToTable . trajectory . 
Some associated R codes: NotExport.R . archidraw.R . archigrow.R . architect.R . bottleneckdist.R . dartToTable.R . fitter.R . latdist.R . perhomology.R . plot.barcode.R . root.R . rsmlToDART.R . rsmlToTable.R . trajectory.R .  Full archiDART package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
binhf  
Haar-Fisz Functions for Binomial Data
Binomial Haar-Fisz transforms for Gaussianization as in Nunes and Nason (2009). ...
Download / Learn more Package Citations See dependency  
footBayes  
Fitting Bayesian and MLE Football Models
This is the first package allowing for the estimation, visualization and prediction of the most wel ...
Download / Learn more Package Citations See dependency  
gamlss.add  
Extra Additive Terms for Generalized Additive Models for Location Scale and Shape
Interface for extra smooth functions including tensor products, neural networks and decision trees. ...
Download / Learn more Package Citations See dependency  
PermAlgo  
Permutational Algorithm to Simulate Survival Data
This version of the permutational algorithm generates a dataset in which event and censoring times ...
Download / Learn more Package Citations See dependency  
pulseTD  
Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data
A tool for analyzing the transcription, processing and degradation rates of genes by 4sU-seq (the Me ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA