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archiDART  

Plant Root System Architecture Analysis Using DART and RSML Files
View on CRAN: Click here


Download and install archiDART package within the R console
Install from CRAN:
install.packages("archiDART")

Install from Github:
library("remotes")
install_github("cran/archiDART")

Install by package version:
library("remotes")
install_version("archiDART", "3.4")



Attach the package and use:
library("archiDART")
Maintained by
Benjamin M Delory
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-12-05
Latest Update: 2021-02-11
Description:
Analysis of complex plant root system architectures (RSA) using the output files created by Data Analysis of Root Tracings (DART), an open-access software dedicated to the study of plant root architecture and development across time series (Le Bot et al (2010) "DART: a software to analyse root system architecture and development from captured images", Plant and Soil, ), and RSA data encoded with the Root System Markup Language (RSML) (Lobet et al (2015) "Root System Markup Language: toward a unified root architecture description language", Plant Physiology, ). More information can be found in Delory et al (2016) "archiDART: an R package for the automated computation of plant root architectural traits", Plant and Soil, .
How to cite:
Benjamin M Delory (2014). archiDART: Plant Root System Architecture Analysis Using DART and RSML Files. R package version 3.4, https://cran.r-project.org/web/packages/archiDART. Accessed 21 Nov. 2024.
Previous versions and publish date:
1.0 (2014-12-05 11:00), 1.1 (2015-06-08 20:25), 1.2 (2015-12-22 15:43), 1.3 (2016-03-06 23:20), 1.4 (2016-03-08 00:11), 2.0 (2017-05-11 09:40), 3.0 (2017-12-21 13:45), 3.2 (2018-04-03 23:34), 3.3 (2019-12-16 17:20)
Other packages that cited archiDART R package
View archiDART citation profile
Other R packages that archiDART depends, imports, suggests or enhances
Complete documentation for archiDART
Functions, R codes and Examples using the archiDART R package
Some associated functions: archidraw . archigrow . architect . bottleneckdist . dartToTable . latdist . perhomology . plot.barcode . root . rsmlToTable . trajectory . 
Some associated R codes: NotExport.R . archidraw.R . archigrow.R . architect.R . bottleneckdist.R . dartToTable.R . fitter.R . latdist.R . perhomology.R . plot.barcode.R . root.R . rsmlToDART.R . rsmlToTable.R . trajectory.R .  Full archiDART package functions and examples
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