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aPEAR
View on CRAN: Click
here
Download and install aPEAR package within the R console
Install from CRAN:
install.packages("aPEAR")
Install from Github:
library("remotes")
install_github("cran/aPEAR") Install by package version:
library("remotes")
install_version("aPEAR", "1.0.0") Attach the package and use:
library("aPEAR")
Maintained by
Ieva Kerseviciute
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-06-12
Latest Update:
Description:
Simplify pathway enrichment analysis results by detecting clusters
of similar pathways and visualizing it as an enrichment network, where
nodes and edges describe the pathways and similarity between them,
respectively. This reduces the redundancy of the overlapping pathways and
helps to notice the most important biological themes in the data
(Kerseviciute and Gordevicius (2023) ).
How to cite:
Ieva Kerseviciute (2023). aPEAR: Advanced Pathway Enrichment Analysis Representation. R package version 1.0.0, https://cran.r-project.org/web/packages/aPEAR. Accessed 25 Jun. 2026.
Previous versions and publish date:
1.0.0 (2023-06-12 20:10)
Other packages that cited aPEAR R package
View aPEAR citation profile
Other R packages that aPEAR depends,
imports, suggests or enhances
Complete documentation for aPEAR
Functions, R codes and Examples using
the aPEAR R package
Some associated functions: aPEAR-package . aPEAR.methods . aPEAR.theme . enrichmentNetwork . findPathClusters . plotPathClusters .
Some associated R codes: aPEAR-package.R . cluster.R . clusterName.R . configuration.R . enrichmentGraph.R . enrichmentNetwork.R . findPathClusters.R . matrix.R . plot.R . prepareEnrichment.R . similarity.R . Full aPEAR package functions and examples
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