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PCMBaseCpp
View on CRAN: Click
here
Download and install PCMBaseCpp package within the R console
Install from CRAN:
install.packages("PCMBaseCpp")
Install from Github:
library("remotes")
install_github("cran/PCMBaseCpp") Install by package version:
library("remotes")
install_version("PCMBaseCpp", "0.1.11") Attach the package and use:
library("PCMBaseCpp")
Maintained by
Venelin Mitov
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All associated links for this package
First Published: 2019-10-06
Latest Update: 2025-05-04
Description:
Provides a C++ backend for multivariate phylogenetic comparative
models implemented in the R-package 'PCMBase'. Can be used in combination
with 'PCMBase' to enable fast and parallel likelihood calculation. Implements
the pruning likelihood calculation algorithm described in Mitov et al. (2018)
. Uses the 'SPLITT' C++ library for parallel tree traversal
described in Mitov and Stadler (2018) .
How to cite:
Venelin Mitov (2019). PCMBaseCpp: Fast Likelihood Calculation for Phylogenetic Comparative Models. R package version 0.1.11, https://cran.r-project.org/web/packages/PCMBaseCpp. Accessed 22 Jun. 2026.
Previous versions and publish date:
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Other R packages that PCMBaseCpp depends,
imports, suggests or enhances
Complete documentation for PCMBaseCpp
Functions, R codes and Examples using
the PCMBaseCpp R package
Some associated functions: BenchmarkRvsCpp . MiniBenchmarkRvsCpp . PCListInt . PCMBaseCppIsADevRelease . PCMInfoCpp . PCMParamGetFullVector . PCMTreePreorderCpp . benchmarkData . benchmarkResults . benchmarkResultsNoTransform .
Some associated R codes: BM.R . BenchmarkRvsCpp.R . DOU.R . Generic.R . JOU.R . MixedGaussian.R . OU.R . Utilities.R . White.R . zzz.R . Full PCMBaseCpp package functions and examples
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