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PCMBaseCpp  

Fast Likelihood Calculation for Phylogenetic Comparative Models
View on CRAN: Click here


Download and install PCMBaseCpp package within the R console
Install from CRAN:
install.packages("PCMBaseCpp")

Install from Github:
library("remotes")
install_github("cran/PCMBaseCpp")

Install by package version:
library("remotes")
install_version("PCMBaseCpp", "0.1.9")



Attach the package and use:
library("PCMBaseCpp")
Maintained by
Venelin Mitov
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-10-06
Latest Update: 2020-03-23
Description:
Provides a C++ backend for multivariate phylogenetic comparative models implemented in the R-package 'PCMBase'. Can be used in combination with 'PCMBase' to enable fast and parallel likelihood calculation. Implements the pruning likelihood calculation algorithm described in Mitov et al. (2018) . Uses the 'SPLITT' C++ library for parallel tree traversal described in Mitov and Stadler (2018) .
How to cite:
Venelin Mitov (2019). PCMBaseCpp: Fast Likelihood Calculation for Phylogenetic Comparative Models. R package version 0.1.9, https://cran.r-project.org/web/packages/PCMBaseCpp. Accessed 22 Dec. 2024.
Previous versions and publish date:
0.1.5 (2019-10-06 14:30), 0.1.6 (2019-11-11 14:30), 0.1.7 (2019-11-21 17:10), 0.1.8 (2020-02-23 19:30)
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