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PAMpal  

Load and Process Passive Acoustic Data
View on CRAN: Click here


Download and install PAMpal package within the R console
Install from CRAN:
install.packages("PAMpal")

Install from Github:
library("remotes")
install_github("cran/PAMpal")

Install by package version:
library("remotes")
install_version("PAMpal", "1.6.1")



Attach the package and use:
library("PAMpal")
Maintained by
Taiki Sakai
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-12-17
Latest Update: 2025-03-04
Description:
Tools for loading and processing passive acoustic data. Read in data that has been processed in 'Pamguard' (), apply a suite processing functions, and export data for reports or external modeling tools. Parameter calculations implement methods by Oswald et al (2007) , Griffiths et al (2020) and Baumann-Pickering et al (2010) .
How to cite:
Taiki Sakai (2020). PAMpal: Load and Process Passive Acoustic Data. R package version 1.6.1, https://cran.r-project.org/web/packages/PAMpal. Accessed 26 Oct. 2026.
Previous versions and publish date:
(2026-09-22 00:12), 0.9.14 (2020-12-17 11:10), 0.13.0 (2021-06-21 19:10), 0.14.4 (2021-10-09 23:10), 0.15.0 (2022-01-10 23:42), 0.16.0 (2022-03-07 00:50), 0.17.0 (2022-11-08 21:20), 0.19.1 (2023-04-20 01:00), 1.0.0 (2023-08-12 01:40), 1.2.1 (2024-07-12 00:50), 1.4.4 (2025-03-04 01:20), 1.5.2 (2026-02-26 21:30)
Other packages that cited PAMpal R package
View PAMpal citation profile
Other R packages that PAMpal depends, imports, suggests or enhances
Complete documentation for PAMpal
Functions, R codes and Examples using the PAMpal R package
Some associated functions: AcousticEvent-class . AcousticStudy-class . PAMpal.accessors . PAMpalSettings-class . PAMpalSettings . addBinaries . addCalibration . addDatabase . addFunction . addGps . addHydrophoneDepth . addNote . addRecordings . addSettings . bindStudies . calculateAverageSpectra . calculateICI . calculateModuleData . checkStudy . exStudy . export_banter . filter . getBinaryData . getClipData . getDetectorData . getWarnings . is.AcousticEvent . is.AcousticStudy . is.PAMpalSettings . loadPamguardXML . matchEnvData . plotDataExplorer . plotGram . plotWaveform . processPgDetections . removeBinaries . removeCalibration . removeDatabase . removeFunction . removeNote . removeSettings . roccaWhistleCalcs . setSpecies . standardCepstrumCalcs . standardClickCalcs . testCeps . testClick . testGPL . testWhistle . updateFiles . updatePamObject . writeEventClips . writeWignerData . 
Some associated R codes: AllClass.R . AllGetSet.R . PAMpalSettings.R . addBinaries.R . addCalibration.R . addDatabase.R . addFunction.R . addGps.R . addHydrophoneDepth.R . addNote.R . addRecordings.R . addSettings.R . bindStudies.R . calculateAverageSpectra.R . calculateICI.R . calculateModuleData.R . checkStudy.R . data.R . export_banter.R . filter.R . getBinaryData.R . getClipData.R . getDetectorData.R . getWarnings.R . loadPamguardXML.R . matchEnvData.R . plotDataExplorer.R . plotGram.R . plotWaveform.R . processPgDetections.R . removeBinaries.R . removeCalibration.R . removeDatabase.R . removeFunction.R . removeNote.R . removeSettings.R . roccaWhistleCalcs.R . setSpecies.R . standardCepstrumCalcs.R . standardClickCalcs.R . updateFiles.R . updatePamObject.R . utils.R . wavUtils.R . writeEventClips.R . writeWignerData.R . zzz.R .  Full PAMpal package functions and examples
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