Other packages > Find by keyword >

OptCirClust  

Circular, Periodic, or Framed Data Clustering: Fast, Optimal, and Reproducible
View on CRAN: Click here


Download and install OptCirClust package within the R console
Install from CRAN:
install.packages("OptCirClust")

Install from Github:
library("remotes")
install_github("cran/OptCirClust")

Install by package version:
library("remotes")
install_version("OptCirClust", "0.0.4")



Attach the package and use:
library("OptCirClust")
Maintained by
Joe Song
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-12-09
Latest Update: 2021-07-28
Description:
Fast, optimal, and reproducible clustering algorithms for circular, periodic, or framed data. The algorithms introduced here are based on a core algorithm for optimal framed clustering the authors have developed (Debnath & Song 2021) . The runtime of these algorithms is O(K N log^2 N), where K is the number of clusters and N is the number of circular data points. On a desktop computer using a single processor core, millions of data points can be grouped into a few clusters within seconds. One can apply the algorithms to characterize events along circular DNA molecules, circular RNA molecules, and circular genomes of bacteria, chloroplast, and mitochondria. One can also cluster climate data along any given longitude or latitude. Periodic data clustering can be formulated as circular clustering. The algorithms offer a general high-performance solution to circular, periodic, or framed data clustering.
How to cite:
Joe Song (2020). OptCirClust: Circular, Periodic, or Framed Data Clustering: Fast, Optimal, and Reproducible. R package version 0.0.4, https://cran.r-project.org/web/packages/OptCirClust. Accessed 26 Oct. 2026.
Previous versions and publish date:
0.0.1 (2020-12-09 11:30), 0.0.2 (2020-12-15 23:30), 0.0.3 (2020-12-18 17:10), (2026-07-09 08:15)
Other packages that cited OptCirClust R package
View OptCirClust citation profile
Other R packages that OptCirClust depends, imports, suggests or enhances
Complete documentation for OptCirClust
Functions, R codes and Examples using the OptCirClust R package
Some associated functions: CirClust . FramedClust . plot.CirClust . plot.FramedClust . 
Some associated R codes: CirClust.R . FramedClust.R . RcppExports.R . kmeans-framed-clust.R . plot-CirClust.R . plot-FramedClust.R . quad-framed-clust.R .  Full OptCirClust package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

LSDsensitivity  
Sensitivity Analysis Tools for 'LSD' Simulations
Tools for sensitivity analysis of LSD simulation models. Reads object-oriented data produced by LSD ...
Download / Learn more Package Citations See dependency  
MARSS  
Multivariate Autoregressive State-Space Modeling
The MARSS package provides maximum-likelihood parameter estimation for constrained and unconstraine ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
rts2  
Log-Gaussian Cox Process Models with Approximations
Supports modelling real-time case data to facilitate the real-time surveillance of infectious disea ...
Download / Learn more Package Citations See dependency  
SADEG  
Stability Analysis in Differentially Expressed Genes
We analyzed the nucleotide composition of genes with a special emphasis on stability of DNA sequence ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA