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MMINP  

Microbe-Metabolite Interactions-Based Metabolic Profiles Predictor
View on CRAN: Click here


Download and install MMINP package within the R console
Install from CRAN:
install.packages("MMINP")

Install from Github:
library("remotes")
install_github("cran/MMINP")

Install by package version:
library("remotes")
install_version("MMINP", "0.1.0")



Attach the package and use:
library("MMINP")
Maintained by
Wenli Tang
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-07-04
Latest Update: 2022-07-04
Description:
Implements a computational framework to predict microbial community-based metabolic profiles with 'O2PLS' model. It provides procedures of model training and prediction. Paired microbiome and metabolome data are needed for modeling, and the trained model can be applied to predict metabolites of analogous environments using new microbial feature abundances.
How to cite:
Wenli Tang (2022). MMINP: Microbe-Metabolite Interactions-Based Metabolic Profiles Predictor. R package version 0.1.0, https://cran.r-project.org/web/packages/MMINP. Accessed 21 Nov. 2024.
Previous versions and publish date:
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