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GLMaSPU  

An Adaptive Test on High Dimensional Parameters in Generalized Linear Models
View on CRAN: Click here


Download and install GLMaSPU package within the R console
Install from CRAN:
install.packages("GLMaSPU")

Install from Github:
library("remotes")
install_github("cran/GLMaSPU")

Install by package version:
library("remotes")
install_version("GLMaSPU", "1.0")



Attach the package and use:
library("GLMaSPU")
Maintained by
Chong Wu
[Scholar Profile | Author Map]
First Published: 2016-12-09
Latest Update: 2016-12-09
Description:
Several tests for high dimensional generalized linear models have been proposed recently. In this package, we implemented a new test called adaptive sum of powered score (aSPU) for high dimensional generalized linear models, which is often more powerful than the existing methods in a wide scenarios. We also implemented permutation based version of several existing methods for research purpose. We recommend users use the aSPU test for their real testing problem. You can learn more about the tests implemented in the package via the following papers: 1. Pan, W., Kim, J., Zhang, Y., Shen, X. and Wei, P. (2014) A powerful and adaptive association test for rare variants, Genetics, 197(4). 2. Guo, B., and Chen, S. X. (2016) . Tests for high dimensional generalized linear models. Journal of the Royal Statistical Society: Series B. 3. Goeman, J. J., Van Houwelingen, H. C., and Finos, L. (2011) . Testing against a high-dimensional alternative in the generalized linear model: asymptotic type I error control. Biometrika, 98(2).
How to cite:
Chong Wu (2016). GLMaSPU: An Adaptive Test on High Dimensional Parameters in Generalized Linear Models. R package version 1.0, https://cran.r-project.org/web/packages/GLMaSPU. Accessed 29 Mar. 2025.
Previous versions and publish date:
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Complete documentation for GLMaSPU
Functions, R codes and Examples using the GLMaSPU R package
Some associated functions: GLMaSPU-package . Goeman_perm . HDGLM_perm . aSPU_apval . aSPU_perm . generate_data . 
Some associated R codes: Goeman_perm.R . HDGLM_perm.R . RcppExports.R . aSPU_apval.R . aSPU_perm.R . generate_data.R . support_fun.R .  Full GLMaSPU package functions and examples
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