Other packages > Find by keyword >

FARDEEP  

Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares
View on CRAN: Click here


Download and install FARDEEP package within the R console
Install from CRAN:
install.packages("FARDEEP")

Install from Github:
library("remotes")
install_github("cran/FARDEEP")

Install by package version:
library("remotes")
install_version("FARDEEP", "1.0.1")



Attach the package and use:
library("FARDEEP")
Maintained by
Yuying Xie
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-04-24
Latest Update: 2019-04-24
Description:
Using the idea of least trimmed square, it could automatically detects and removes outliers from data before estimating the coefficients. It is a robust machine learning tool which can be applied to gene-expression deconvolution technique. Yuning Hao, Ming Yan, Blake R. Heath, Yu L. Lei and Yuying Xie (2019) .
How to cite:
Yuying Xie (2019). FARDEEP: Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares. R package version 1.0.1, https://cran.r-project.org/web/packages/FARDEEP. Accessed 26 Oct. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited FARDEEP R package
View FARDEEP citation profile
Other R packages that FARDEEP depends, imports, suggests or enhances
Complete documentation for FARDEEP
Functions, R codes and Examples using the FARDEEP R package
Some associated functions: LM22 . alts . fardeep . mixture . sample.sim . tuningBIC . 
Some associated R codes: alts.R . data.R . fardeep.R . sample.sim.R . tuningBIC.R .  Full FARDEEP package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

SADEG  
Stability Analysis in Differentially Expressed Genes
We analyzed the nucleotide composition of genes with a special emphasis on stability of DNA sequence ...
Download / Learn more Package Citations See dependency  
MARSS  
Multivariate Autoregressive State-Space Modeling
The MARSS package provides maximum-likelihood parameter estimation for constrained and unconstraine ...
Download / Learn more Package Citations See dependency  
LSDsensitivity  
Sensitivity Analysis Tools for 'LSD' Simulations
Tools for sensitivity analysis of LSD simulation models. Reads object-oriented data produced by LSD ...
Download / Learn more Package Citations See dependency  
rts2  
Log-Gaussian Cox Process Models with Approximations
Supports modelling real-time case data to facilitate the real-time surveillance of infectious disea ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA