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EpiSignalDetection
View on CRAN: Click
here
Download and install EpiSignalDetection package within the R console
Install from CRAN:
install.packages("EpiSignalDetection")
Install from Github:
library("remotes")
install_github("cran/EpiSignalDetection")
Install by package version:
library("remotes")
install_version("EpiSignalDetection", "0.1.2")
Attach the package and use:
library("EpiSignalDetection")
Maintained by
Lore Merdrignac
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-11-14
Latest Update: 2021-11-30
Description:
Exploring time series for signal detection. It is specifically designed
to detect possible outbreaks using infectious disease surveillance data
at the European Union / European Economic Area or country level.
Automatic detection tools used are presented in the paper
"Monitoring count time series in R: aberration detection in public health surveillance",
by Salmon (2016) .
The package includes:
- Signal Detection tool, an interactive 'shiny' application
in which the user can import external data and perform basic signal detection analyses;
- An automated report in HTML format, presenting the results of the time series analysis in tables and graphs.
This report can also be stratified by population characteristics (see 'Population' variable).
This project was funded by the European Centre for Disease Prevention and Control.
How to cite:
Lore Merdrignac (2018). EpiSignalDetection: Signal Detection Analysis. R package version 0.1.2, https://cran.r-project.org/web/packages/EpiSignalDetection
Other packages that cited EpiSignalDetection R package
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Other R packages that EpiSignalDetection depends,
imports, suggests or enhances
Functions, R codes and Examples using
the EpiSignalDetection R package
Some associated functions: AlgoParam . SignalData . aggAtlasExport . algoSD . cleanAtlasExport . filterAtlasExport . importAtlasExport . plotSD . runEpiSDApp . runEpiSDReport . stsSD . studyPeriod .
Some associated R codes: data.R . internal_functions.R . runEpiSDApp.R . runEpiSDReport.R . Full EpiSignalDetection package functions and examples
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