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EpiSignalDetection  

Signal Detection Analysis
View on CRAN: Click here


Download and install EpiSignalDetection package within the R console
Install from CRAN:
install.packages("EpiSignalDetection")

Install from Github:
library("remotes")
install_github("cran/EpiSignalDetection")

Install by package version:
library("remotes")
install_version("EpiSignalDetection", "0.1.3")



Attach the package and use:
library("EpiSignalDetection")
Maintained by
Lore Merdrignac
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-11-14
Latest Update: 2021-11-30
Description:
Exploring time series for signal detection. It is specifically designed to detect possible outbreaks using infectious disease surveillance data at the European Union / European Economic Area or country level. Automatic detection tools used are presented in the paper "Monitoring count time series in R: aberration detection in public health surveillance", by Salmon (2016) . The package includes: - Signal Detection tool, an interactive 'shiny' application in which the user can import external data and perform basic signal detection analyses; - An automated report in HTML format, presenting the results of the time series analysis in tables and graphs. This report can also be stratified by population characteristics (see 'Population' variable). This project was funded by the European Centre for Disease Prevention and Control.
How to cite:
Lore Merdrignac (2018). EpiSignalDetection: Signal Detection Analysis. R package version 0.1.3, https://cran.r-project.org/web/packages/EpiSignalDetection. Accessed 26 Oct. 2026.
Previous versions and publish date:
0.1.0 (2018-11-14 12:10), 0.1.1 (2018-11-15 23:00), 0.1.2 (2021-11-30 16:00), (2026-07-09 08:03)
Other packages that cited EpiSignalDetection R package
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Other R packages that EpiSignalDetection depends, imports, suggests or enhances
Complete documentation for EpiSignalDetection
Functions, R codes and Examples using the EpiSignalDetection R package
Some associated functions: AlgoParam . SignalData . aggAtlasExport . algoSD . cleanAtlasExport . filterAtlasExport . importAtlasExport . plotSD . runEpiSDApp . runEpiSDReport . stsSD . studyPeriod . 
Some associated R codes: data.R . internal_functions.R . runEpiSDApp.R . runEpiSDReport.R .  Full EpiSignalDetection package functions and examples
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