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CoreMicrobiomeR  

Identification of Core Microbiome
View on CRAN: Click here


Download and install CoreMicrobiomeR package within the R console
Install from CRAN:
install.packages("CoreMicrobiomeR")

Install from Github:
library("remotes")
install_github("cran/CoreMicrobiomeR")

Install by package version:
library("remotes")
install_version("CoreMicrobiomeR", "0.1.0")



Attach the package and use:
library("CoreMicrobiomeR")
Maintained by
Mohammad Samir Farooqi
[Scholar Profile | Author Map]
First Published: 2024-04-03
Latest Update: 2024-04-03
Description:
The Core Microbiome refers to the group of microorganisms that are consistently present in a particular environment, habitat, or host species. These microorganisms play a crucial role in the functioning and stability of that ecosystem. Identifying these microorganisms can contribute to the emerging field of personalized medicine. The 'CoreMicrobiomeR' is designed to facilitate the identification, statistical testing, and visualization of this group of microorganisms.This package offers three key functions to analyze and visualize microbial community data. This package has been developed based on the research papers published by Pereira et al.(2018) and Beule L, Karlovsky P. (2020) .
How to cite:
Mohammad Samir Farooqi (2024). CoreMicrobiomeR: Identification of Core Microbiome. R package version 0.1.0, https://cran.r-project.org/web/packages/CoreMicrobiomeR. Accessed 17 Feb. 2025.
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Functions, R codes and Examples using the CoreMicrobiomeR R package
Full CoreMicrobiomeR package functions and examples
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