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CleanBSequences  

Curing of Biological Sequences
View on CRAN: Click here


Download and install CleanBSequences package within the R console
Install from CRAN:
install.packages("CleanBSequences")

Install from Github:
library("remotes")
install_github("cran/CleanBSequences")

Install by package version:
library("remotes")
install_version("CleanBSequences", "2.3.0")



Attach the package and use:
library("CleanBSequences")
Maintained by
Florencia I. Pozzi
[Scholar Profile | Author Map]
First Published: 2018-05-11
Latest Update: 2022-04-27
Description:
Curates biological sequences massively, quickly, without errors and without internet connection. Biological sequences curing is performed by aligning the forward and / or revers primers or ends of cloning vectors with the sequences to be cleaned. After the alignment, new subsequences are generated without biological fragment not desired by the user. Pozzi et al (2020) .
How to cite:
Florencia I. Pozzi (2018). CleanBSequences: Curing of Biological Sequences. R package version 2.3.0, https://cran.r-project.org/web/packages/CleanBSequences. Accessed 29 Mar. 2025.
Previous versions and publish date:
0.4.0 (2018-05-11 15:25), 1.4.0 (2022-04-27 19:40)
Other packages that cited CleanBSequences R package
View CleanBSequences citation profile
Other R packages that CleanBSequences depends, imports, suggests or enhances
Complete documentation for CleanBSequences
Functions, R codes and Examples using the CleanBSequences R package
Some associated functions: DNAStringSetOPR . DNAStringSetTPR . OnePrimerRemove . TwoPrimerRemove . 
Some associated R codes: DNAStringSetOPR.R . DNAStringSetTPR.R . OnePrimerRemove.R . TwoPrimersRemove.R .  Full CleanBSequences package functions and examples
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