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CIDER  

Meta-Clustering for scRNA-Seq Integration and Evaluation
View on CRAN: Click here


Download and install CIDER package within the R console
Install from CRAN:
install.packages("CIDER")

Install from Github:
library("remotes")
install_github("cran/CIDER")

Install by package version:
library("remotes")
install_version("CIDER", "0.99.4")



Attach the package and use:
library("CIDER")
Maintained by
Zhiyuan Hu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-11-19
Latest Update:
Description:
A workflow of (a) meta-clustering based on inter-group similarity measures and (b) a ground-truth-free test metric to assess the biological correctness of integration in real datasets. See Hu Z, Ahmed A, Yau C (2021) for more details.
How to cite:
Zhiyuan Hu (2021). CIDER: Meta-Clustering for scRNA-Seq Integration and Evaluation. R package version 0.99.4, https://cran.r-project.org/web/packages/CIDER. Accessed 15 Jun. 2026.
Previous versions and publish date:
0.99.0 (2021-11-19 15:40), 0.99.1 (2022-09-19 05:16), 0.99.4 (2025-02-07 10:50)
Other packages that cited CIDER R package
View CIDER citation profile
Other R packages that CIDER depends, imports, suggests or enhances
Complete documentation for CIDER
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