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CDROM  

Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data
View on CRAN: Click here


Download and install CDROM package within the R console
Install from CRAN:
install.packages("CDROM")

Install from Github:
library("remotes")
install_github("cran/CDROM")

Install by package version:
library("remotes")
install_version("CDROM", "1.1")



Attach the package and use:
library("CDROM")
Maintained by
Raquel Assis
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-03-23
Latest Update: 2023-08-18
Description:
Classification is based on the recently developed phylogenetic approach by Assis and Bachtrog (2013). The method classifies the evolutionary mechanisms retaining pairs of duplicate genes (conservation, neofunctionalization, subfunctionalization, or specialization) by comparing gene expression profiles of duplicate genes in one species to those of their single- copy ancestral genes in a sister species.
How to cite:
Raquel Assis (2016). CDROM: Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data. R package version 1.1, https://cran.r-project.org/web/packages/CDROM. Accessed 07 Apr. 2025.
Previous versions and publish date:
1.0 (2016-03-23 00:10), 1.1 (2016-04-27 18:56)
Other packages that cited CDROM R package
View CDROM citation profile
Other R packages that CDROM depends, imports, suggests or enhances
Functions, R codes and Examples using the CDROM R package
Some associated functions: CDROM . 
Some associated R codes: CDROM.R .  Full CDROM package functions and examples
Downloads during the last 30 days
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