Other packages > Find by keyword >

ADAPTS  

Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells
View on CRAN: Click here


Download and install ADAPTS package within the R console
Install from CRAN:
install.packages("ADAPTS")

Install from Github:
library("remotes")
install_github("cran/ADAPTS")

Install by package version:
library("remotes")
install_version("ADAPTS", "1.0.22")



Attach the package and use:
library("ADAPTS")
Maintained by
Samuel A Danziger
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-05-17
Latest Update: 2022-09-14
Description:
Tools to construct (or add to) cell-type signature matrices using flow sorted or single cell samples and deconvolve bulk gene expression data. Useful for assessing the quality of single cell RNAseq experiments, estimating the accuracy of signature matrices, and determining cell-type spillover. Please cite: Danziger SA et al. (2019) ADAPTS: Automated Deconvolution Augmentation of Profiles for Tissue Specific cells .
How to cite:
Samuel A Danziger (2019). ADAPTS: Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells. R package version 1.0.22, https://cran.r-project.org/web/packages/ADAPTS. Accessed 22 Dec. 2024.
Previous versions and publish date:
0.9.14 (2019-05-17 18:00), 0.9.20 (2019-06-18 00:01), 0.9.21 (2019-08-07 06:10), 0.9.26 (2019-10-29 06:10), 1.0.3 (2020-08-06 01:22), 1.0.5 (2020-08-31 23:50), 1.0.6 (2020-10-17 06:10), 1.0.21 (2021-10-05 10:30)
Other packages that cited ADAPTS R package
View ADAPTS citation profile
Other R packages that ADAPTS depends, imports, suggests or enhances
Complete documentation for ADAPTS
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

Rfast2  
A Collection of Efficient and Extremely Fast R Functions II
A collection of fast statistical and utility functions for data analysis. Functions for regression, ...
Download / Learn more Package Citations See dependency  
wordspace  
Distributional Semantic Models in R
An interactive laboratory for research on distributional semantic models ('DSM', see < ...
Download / Learn more Package Citations See dependency  
tropAlgebra  
Tropical Algebraic Functions
It includes functions like tropical addition, tropical multiplication for vectors and matrices. In t ...
Download / Learn more Package Citations See dependency  
dmlalg  
Double Machine Learning Algorithms
Implementation of double machine learning (DML) algorithms in R, based on Emmenegger and Buehlmann ...
Download / Learn more Package Citations See dependency  
composits  
Compositional, Multivariate and Univariate Time Series Outlier Ensemble
A compositional multivariate and univariate time series outlier ensemble.It uses the four R packages ...
Download / Learn more Package Citations See dependency  
elect  
Estimation of Life Expectancies Using Multi-State Models
Functions to compute state-specific and marginal life expectancies. The computation is based on a fi ...
Download / Learn more Package Citations See dependency  

23,394

R Packages

201,798

Dependencies

63,416

Author Associations

23,395

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA