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ADAPTS  

Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells
View on CRAN: Click here


Download and install ADAPTS package within the R console
Install from CRAN:
install.packages("ADAPTS")

Install from Github:
library("remotes")
install_github("cran/ADAPTS")

Install by package version:
library("remotes")
install_version("ADAPTS", "1.0.22")



Attach the package and use:
library("ADAPTS")
Maintained by
Samuel A Danziger
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-05-17
Latest Update: 2022-09-14
Description:
Tools to construct (or add to) cell-type signature matrices using flow sorted or single cell samples and deconvolve bulk gene expression data. Useful for assessing the quality of single cell RNAseq experiments, estimating the accuracy of signature matrices, and determining cell-type spillover. Please cite: Danziger SA et al. (2019) ADAPTS: Automated Deconvolution Augmentation of Profiles for Tissue Specific cells .
How to cite:
Samuel A Danziger (2019). ADAPTS: Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells. R package version 1.0.22, https://cran.r-project.org/web/packages/ADAPTS. Accessed 06 Nov. 2024.
Previous versions and publish date:
0.9.14 (2019-05-17 18:00), 0.9.20 (2019-06-18 00:01), 0.9.21 (2019-08-07 06:10), 0.9.26 (2019-10-29 06:10), 1.0.3 (2020-08-06 01:22), 1.0.5 (2020-08-31 23:50), 1.0.6 (2020-10-17 06:10), 1.0.21 (2021-10-05 10:30)
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