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xlink  

Genetic Association Models for X-Chromosome SNPS on Continuous, Binary and Survival Outcomes
View on CRAN: Click here


Download and install xlink package within the R console
Install from CRAN:
install.packages("xlink")

Install from Github:
library("remotes")
install_github("cran/xlink")

Install by package version:
library("remotes")
install_version("xlink", "1.0.1")



Attach the package and use:
library("xlink")
Maintained by
Yi Zhu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-07-03
Latest Update: 2019-08-20
Description:
The expression of X-chromosome undergoes three possible biological processes: X-chromosome inactivation (XCI), escape of the X-chromosome inactivation (XCI-E),and skewed X-chromosome inactivation (XCI-S). To analyze the X-linked genetic association for phenotype such as continuous, binary, and time-to-event outcomes with the actual process unknown, we propose a unified approach of maximizing the likelihood or partial likelihood over all of the potential biological processes. The methods are described in Wei Xu, Meiling Hao (2017) <doi:10.1002/gepi.22097>. And also see Dongxiao Han, Meiling Hao, Lianqiang Qu, Wei Xu (2019) <doi:10.1177/0962280219859037>.
How to cite:
Yi Zhu (2019). xlink: Genetic Association Models for X-Chromosome SNPS on Continuous, Binary and Survival Outcomes. R package version 1.0.1, https://cran.r-project.org/web/packages/xlink. Accessed 07 Nov. 2024.
Previous versions and publish date:
1.0.0 (2019-07-03 17:10)
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Complete documentation for xlink
Functions, R codes and Examples using the xlink R package
Some associated functions: MAF . Rdata . fit_XCI_E_model . fit_XCI_model . fit_all_models . infor_table . select_output . xlink . xlink_fit . 
Some associated R codes: MAF.R . Rdata.R . fit_XCI_E_model.R . fit_XCI_model.R . fit_all_models.R . infor_table.R . select_output.R . xlink.R . xlink_fit.R .  Full xlink package functions and examples
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