Other packages > Find by keyword >

tidysdm  

Species Distribution Models with Tidymodels
View on CRAN: Click here


Download and install tidysdm package within the R console
Install from CRAN:
install.packages("tidysdm")

Install from Github:
library("remotes")
install_github("cran/tidysdm")

Install by package version:
library("remotes")
install_version("tidysdm", "1.0.0")



Attach the package and use:
library("tidysdm")
Maintained by
Andrea Manica
[Scholar Profile | Author Map]
First Published: 2023-11-13
Latest Update: 2024-01-17
Description:
Fit species distribution models (SDMs) using the 'tidymodels' framework, which provides a standardised interface to define models and process their outputs. 'tidysdm' expands 'tidymodels' by providing methods for spatial objects, as well as a number of specialised functions to process presences and pseudoabsences for contemporary and palaeo datasets. The full functionalities of the package are described in Leonardi et al. (2023) <doi:10.1101/2023.07.24.550358>.
How to cite:
Andrea Manica (2023). tidysdm: Species Distribution Models with Tidymodels. R package version 1.0.0, https://cran.r-project.org/web/packages/tidysdm. Accessed 09 May. 2025.
Previous versions and publish date:
0.9.2 (2023-11-13 18:30), 0.9.3 (2024-01-17 21:50), 0.9.4 (2024-03-05 21:30), 0.9.5 (2024-06-23 21:40)
Other packages that cited tidysdm R package
View tidysdm citation profile
Other R packages that tidysdm depends, imports, suggests or enhances
Complete documentation for tidysdm
Functions, R codes and Examples using the tidysdm R package
Some associated functions: add_member . add_repeat . autoplot.simple_ensemble . autoplot.spatial_initial_split . blockcv2rsample . boyce_cont . calib_class_thresh . check_coords_names . check_sdm_presence . check_splits_balance . collect_metrics.simple_ensemble . conf_matrix_df . control_ensemble . dist_pres_vs_bg . explain_tidysdm . filter_high_cor . form_resp . gam_formula . geom_split_violin . grid_cellsize . grid_offset . horses . kap_max . km2m . lacerta . lacerta_ensemble . lacerta_rep_ens . maxent . maxent_params . maxnet_fit . maxnet_predict . optim_thresh . optim_thresh_kap_max . optim_thresh_sens . optim_thresh_tss_max . out_of_range_warning . pipe . plot_pres_vs_bg . predict.repeat_ensemble . predict.simple_ensemble . predict_raster . prob_metrics_sf . prob_to_binary . recipe.sf . repeat_ensemble . sample_pseudoabs . sample_pseudoabs_time . sdm_metric_set . sdm_spec_boost_tree . sdm_spec_gam . sdm_spec_glm . sdm_spec_maxent . sdm_spec_rand_forest . simple_ensemble . spatial_initial_split . thin_by_cell . thin_by_cell_time . thin_by_dist . thin_by_dist_time . tidysdm . tss . tss_max . y2d . 
Some associated R codes: add_member.R . add_repeat.R . autoplot_simple_ensemble.R . autoplot_spatial_initial_split.R . blockcv2rsample.R . boyce_cont.R . calib_class_thresh.R . check_coords_names.R . check_sdm_presence.R . check_split_balance.R . collect_metrics.R . confusion_matrix_df.R . control.R . datasets_docs.R . dist_pres_vs_abs.R . explain_tidysdm.R . filter_high_cor.R . gam_formula.R . geom_split_violin.R . grid_cellsize.R . grid_offset.R . kap_max.R . km2m.R . make_maxent.R . maxent.R . maxent_params.R . maxnet_fit.R . optim_thresh.R . out_of_range_warning.R . plot_pres_vs_abs.R . predict_raster.R . predict_repeat_ensemble.R . predict_simple_ensemble.R . prob_metrics.R . recipe_sf.R . recipes_sf_methods.R . repeat_ensemble.R . sample_pseudoabs.R . sample_pseudoabs_time.R . sdm_metric_set.R . sdm_spec_boost_tree.R . sdm_spec_gam.R . sdm_spec_glm.R . sdm_spec_maxent.R . sdm_spec_rand_forest.R . simple_ensemble.R . spatial_initial_split.R . thin_by_cell.R . thin_by_cell_time.R . thin_by_dist.R . thin_by_dist_time.R . tidysdm.R . tss.R . tss_max.R . utils-pipe.R . y2d.R . zzz.R .  Full tidysdm package functions and examples
Downloads during the last 30 days
04/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/2904/3005/0105/0205/0305/0405/0505/0605/07Downloads for tidysdm51015202530TrendBars

Today's Hot Picks in Authors and Packages

nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
SACOBRA  
Self-Adjusting COBRA
Performs surrogate-assisted optimization for expensive black-box constrained problems. ...
Download / Learn more Package Citations See dependency  
disparityfilter  
Disparity Filter Algorithm for Weighted Networks
The disparity filter algorithm is a network reduction technique to identify the 'backbone' structur ...
Download / Learn more Package Citations See dependency  
assertive.numbers  
Assertions to Check Properties of Numbers
A set of predicates and assertions for checking the properties of numbers. This is mainly for use ...
Download / Learn more Package Citations See dependency  

24,205

R Packages

207,311

Dependencies

65,312

Author Associations

24,206

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA