Other packages > Find by keyword >

shinySIR  

Interactive Plotting for Mathematical Models of Infectious Disease Spread
View on CRAN: Click here


Download and install shinySIR package within the R console
Install from CRAN:
install.packages("shinySIR")

Install from Github:
library("remotes")
install_github("cran/shinySIR")

Install by package version:
library("remotes")
install_version("shinySIR", "0.1.2")



Attach the package and use:
library("shinySIR")
Maintained by
Sinead E. Morris
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-01-20
Latest Update: 2020-10-18
Description:
Provides interactive plotting for mathematical models of infectious disease spread. Users can choose from a variety of common built-in ordinary differential equation (ODE) models (such as the SIR, SIRS, and SIS models), or create their own. This latter flexibility allows 'shinySIR' to be applied to simple ODEs from any discipline. The package is a useful teaching tool as students can visualize how changing different parameters can impact model dynamics, with minimal knowledge of coding in R. The built-in models are inspired by those featured in Keeling and Rohani (2008) and Bjornstad (2018) .
How to cite:
Sinead E. Morris (2020). shinySIR: Interactive Plotting for Mathematical Models of Infectious Disease Spread. R package version 0.1.2, https://cran.r-project.org/web/packages/shinySIR. Accessed 18 Sep. 2026.
Previous versions and publish date:
(2026-07-09 07:04), 0.1.0 (2020-01-20 10:30), 0.1.1 (2020-02-03 22:50), 0.1.2 (2020-10-18 20:50)
Other packages that cited shinySIR R package
View shinySIR citation profile
Other R packages that shinySIR depends, imports, suggests or enhances
Complete documentation for shinySIR
Functions, R codes and Examples using the shinySIR R package
Some associated functions: SIR . SIRS . SIRSbirths . SIRSvaccination . SIRbirths . SIRvaccination . SIS . SISbirths . default_models . get_ics . get_name . get_params . plot_model . run_shiny . seir.app . seirs.app . solve_eqns . 
Some associated R codes: default_ics.R . default_names.R . default_params.R . globals.R . model_info.R . models.R . plotting.R . run_shiny.R . seasonalseir.R . seirs.R . solving.R .  Full shinySIR package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

injectoR  
R Dependency Injection
R dependency injection framework. Dependency injection allows a program design to follow the depend ...
Download / Learn more Package Citations See dependency  
hmeasure  
The H-Measure and Other Scalar Classification Performance Metrics
Classification performance metrics that are derived from the ROC curve of a classifier. The package ...
Download / Learn more Package Citations See dependency  
eyelinker  
Import ASC Files from EyeLink Eye Trackers
Imports plain-text ASC data files from EyeLink eye trackers into (relatively) tidy data frames for ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
downlit  
Syntax Highlighting and Automatic Linking
Syntax highlighting of R code, specifically designed for the needs of 'RMarkdown' packages like 'pk ...
Download / Learn more Package Citations See dependency  
data360r  
Wrapper for 'TCdata360' and 'Govdata360' API
Makes it easy to engage with the Application Program Interface (API) of the 'TCdata360' and 'Govdat ...
Download / Learn more Package Citations See dependency  

28,565

R Packages

239,283

Dependencies

75,677

Author Associations

28,566

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA