Other packages > Find by keyword >

scISR  

Single-Cell Imputation using Subspace Regression
View on CRAN: Click here


Download and install scISR package within the R console
Install from CRAN:
install.packages("scISR")

Install from Github:
library("remotes")
install_github("cran/scISR")

Install by package version:
library("remotes")
install_version("scISR", "0.1.1")



Attach the package and use:
library("scISR")
Maintained by
Duc Tran
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-06-30
Latest Update: 2022-06-30
Description:
Provides an imputation pipeline for single-cell RNA sequencing data. The 'scISR' method uses a hypothesis-testing technique to identify zero-valued entries that are most likely affected by dropout events and estimates the dropout values using a subspace regression model (Tran et.al. (2022) ).
How to cite:
Duc Tran (2022). scISR: Single-Cell Imputation using Subspace Regression. R package version 0.1.1, https://cran.r-project.org/web/packages/scISR. Accessed 06 Jun. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited scISR R package
View scISR citation profile
Other R packages that scISR depends, imports, suggests or enhances
Complete documentation for scISR
Functions, R codes and Examples using the scISR R package
Some associated functions: Goolam . scISR . 
Some associated R codes: PerturbationClustering.R . Util.R . scISR.R .  Full scISR package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

rwavelet  
Wavelet Analysis
Perform wavelet analysis (orthogonal,translation invariant, tensorial, 1-2-3d transforms, thresholdi ...
Download / Learn more Package Citations See dependency  
worrrd  
Generate Wordsearch and Crossword Puzzles
Generate wordsearch and crossword puzzles using custom lists of words (and clues).Make them easy or ...
Download / Learn more Package Citations See dependency  
BALLI  
Expression RNA-Seq Data Analysis Based on Linear Mixed Model
Analysis of gene expression RNA-seq data using Bartlett-Adjusted Likelihood-based LInear model (BALL ...
Download / Learn more Package Citations See dependency  
odbc  
Connect to ODBC Compatible Databases (using the DBI Interface)
A DBI-compatible interface to ODBC databases. ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
IAPWS95  
Thermophysical Properties of Water and Steam
An implementation of the International Association for the Properties of Water (IAPWS) Formulation ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,820

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA