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read.gb
View on CRAN: Click
here
Download and install read.gb package within the R console
Install from CRAN:
install.packages("read.gb")
Install from Github:
library("remotes")
install_github("cran/read.gb")
Install by package version:
library("remotes")
install_version("read.gb", "2.2")
Attach the package and use:
library("read.gb")
Maintained by
Robin Mercier
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-11-26
Latest Update: 2021-09-06
Description:
Opens complete record(s) with .gb extension from the NCBI/GenBank Nucleotide database and returns a list containing shaped record(s). These kind of files contains detailed records of DNA samples (locus, organism, type of sequence, source of the sequence...). An example of record can be found at <https://www.ncbi.nlm.nih.gov/nuccore/HE799070>.
How to cite:
Robin Mercier (2018). read.gb: Open GenBank Files. R package version 2.2, https://cran.r-project.org/web/packages/read.gb
Other packages that cited read.gb R package
View read.gb citation profile
Other R packages that read.gb depends,
imports, suggests or enhances
Functions, R codes and Examples using
the read.gb R package
Some associated functions: extract.gb . read.gb .
Some associated R codes: CDS.F.R . C_region.F.R . DNA.treatment.R . D_loop.F.R . D_segment.F.R . F_UTR.F.R . Feature.sep.R . J_segment.F.R . N_region.F.R . Reference.sep.R . Reorganize.report.R . STS.F.R . S_region.F.R . T_UTR.F.R . V_region.F.R . V_segment.F.R . assembly_gap.F.R . centromere.F.R . exon.F.R . extract.gb.R . gap.F.R . gene.F.R . iDNA.F.R . intron.F.R . mRNA.F.R . mat_peptide.F.R . misc_RNA.F.R . misc_binding.F.R . misc_difference.F.R . misc_feature.F.R . misc_recomb.F.R . misc_structure.F.R . mobile_element.F.R . modified_base.F.R . ncRNA.F.R . old_sequence.F.R . operon.F.R . oriT.F.R . polyA_site.F.R . precursor_RNA.F.R . prim_transcript.F.R . primer_bind.F.R . propeptide.F.R . protein_bind.F.R . rRNA.F.R . read.gb.R . regulatory.F.R . rep_origin.F.R . repeat_region.F.R . sig_peptide.F.R . source.F.R . stem_loop.F.R . tRNA.F.R . telomere.F.R . tmRNA.F.R . transit_peptide.F.R . unsure.F.R . variation.F.R . Full read.gb package functions and examples
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