Other packages > Find by keyword >

rPBK  

Inference and Prediction of Generic Physiologically-Based Kinetic Models
View on CRAN: Click here


Download and install rPBK package within the R console
Install from CRAN:
install.packages("rPBK")

Install from Github:
library("remotes")
install_github("cran/rPBK")

Install by package version:
library("remotes")
install_version("rPBK", "0.2.5")



Attach the package and use:
library("rPBK")
Maintained by
Virgile Baudrot
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2022-09-01
Latest Update: 2025-06-12
Description:
Fit and simulate any kind of physiologically-based kinetic ('PBK') models whatever the number of compartments. Moreover, it allows to account for any link between pairs of compartments, as well as any link of each of the compartments with the external medium. Such generic PBK models have today applications in pharmacology (PBPK models) to describe drug effects, in toxicology and ecotoxicology (PBTK models) to describe chemical substance effects. In case of exposure to a parent compound (drug or chemical) the 'rPBK' package allows to consider metabolites, whatever their number and their phase (I, II, ...). Last but not least, package 'rPBK' can also be used for dynamic flux balance analysis (dFBA) to deal with metabolic networks. See also Charles et al. (2022) .
How to cite:
Virgile Baudrot (2022). rPBK: Inference and Prediction of Generic Physiologically-Based Kinetic Models. R package version 0.2.5, https://cran.r-project.org/web/packages/rPBK. Accessed 05 Jun. 2026.
Previous versions and publish date:
0.2.0 (2022-09-01 17:10), 0.2.1 (2023-03-15 16:30), 0.2.2 (2023-09-11 15:20), 0.2.3 (2024-02-01 10:20), 0.2.4 (2024-02-26 18:00)
Other packages that cited rPBK R package
View rPBK citation profile
Other R packages that rPBK depends, imports, suggests or enhances
Complete documentation for rPBK
Functions, R codes and Examples using the rPBK R package
Some associated functions: PPC . dataCompartment4 . dataMaleGammarusSingle . dataPBK . df_quant95_ . export_interpolate . fitPBK . fitPBK_C4 . plot.fitPBK . rPBK-package . 
Some associated R codes: data.R . dataPBK.R . fitPBK.R . globals.R . plotFIT.R . plotPPC.R . predictPBK.R . rPBK-package.R . stanmodels.R .  Full rPBK package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
msm  
Multi-State Markov and Hidden Markov Models in Continuous Time
Functions for fitting continuous-time Markov and hidden Markov multi-state models to longitudinal d ...
Download / Learn more Package Citations See dependency  
ibb  
R Wrapper for Istanbul Municipality Open Data Portal
Call wrappers for Istanbul Metropolitan Municipality's Open Data Portal (Turkish: Istanbul B ...
Download / Learn more Package Citations See dependency  
crossurr  
Cross-Fitting for Doubly Robust Evaluation of High-Dimensional Surrogate Markers
Doubly robust methods for evaluating surrogate markers as outlined in: Agniel D, Hejblum BP, Thiebau ...
Download / Learn more Package Citations See dependency  
envirem  
Generation of ENVIREM Variables
Generation of bioclimatic rasters that are complementary to the typical 19 bioclim variables. ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,590

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA