Other packages > Find by keyword >

miniLNM  

Miniature Logistic-Normal Multinomial Models
View on CRAN: Click here


Download and install miniLNM package within the R console
Install from CRAN:
install.packages("miniLNM")

Install from Github:
library("remotes")
install_github("cran/miniLNM")

Install by package version:
library("remotes")
install_version("miniLNM", "0.1.0")



Attach the package and use:
library("miniLNM")
Maintained by
Kris Sankaran
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-09-13
Latest Update: 2024-09-13
Description:
Logistic-normal Multinomial (LNM) models are common in problems with multivariate count data. This package gives a simple implementation with a 30 line 'Stan' script. This lightweight implementation makes it an easy starting point for other projects, in particular for downstream tasks that require analysis of "compositional" data. It can be applied whenever a multinomial probability parameter is thought to depend linearly on inputs in a transformed, log ratio space. Additional utilities make it easy to inspect, create predictions, and draw samples using the fitted models. More about the LNM can be found in Xia et al. (2013) "A Logistic Normal Multinomial Regression Model for Microbiome Compositional Data Analysis" <doi:10.1111/biom.12079> and Sankaran and Holmes (2023) "Generative Models: An Interdisciplinary Perspective" <doi:10.1146/annurev-statistics-033121-110134>.
How to cite:
Kris Sankaran (2024). miniLNM: Miniature Logistic-Normal Multinomial Models. R package version 0.1.0, https://cran.r-project.org/web/packages/miniLNM. Accessed 05 Jun. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited miniLNM R package
View miniLNM citation profile
Other R packages that miniLNM depends, imports, suggests or enhances
Complete documentation for miniLNM
Functions, R codes and Examples using the miniLNM R package
Full miniLNM package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

ibb  
R Wrapper for Istanbul Municipality Open Data Portal
Call wrappers for Istanbul Metropolitan Municipality's Open Data Portal (Turkish: Istanbul B ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
crossurr  
Cross-Fitting for Doubly Robust Evaluation of High-Dimensional Surrogate Markers
Doubly robust methods for evaluating surrogate markers as outlined in: Agniel D, Hejblum BP, Thiebau ...
Download / Learn more Package Citations See dependency  
envirem  
Generation of ENVIREM Variables
Generation of bioclimatic rasters that are complementary to the typical 19 bioclim variables. ...
Download / Learn more Package Citations See dependency  
msm  
Multi-State Markov and Hidden Markov Models in Continuous Time
Functions for fitting continuous-time Markov and hidden Markov multi-state models to longitudinal d ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,590

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA