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ASMap  

Linkage Map Construction using the MSTmap Algorithm
View on CRAN: Click here


Download and install ASMap package within the R console
Install from CRAN:
install.packages("ASMap")

Install from Github:
library("remotes")
install_github("cran/ASMap")

Install by package version:
library("remotes")
install_version("ASMap", "1.1-0")



Attach the package and use:
library("ASMap")
Maintained by
Julian Taylor
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-09-24
Latest Update: 2024-11-01
Description:
Functions for Accurate and Speedy linkage map construction, manipulation and diagnosis of Doubled Haploid, Backcross and Recombinant Inbred 'R/qtl' objects. This includes extremely fast linkage map clustering and optimal marker ordering using 'MSTmap' (see Wu et al.,2008).
How to cite:
Julian Taylor (2014). ASMap: Linkage Map Construction using the MSTmap Algorithm. R package version 1.1-0, https://cran.r-project.org/web/packages/ASMap. Accessed 05 Oct. 2026.
Previous versions and publish date:
0.3-1 (2014-09-30 14:41), 0.3-2 (2014-10-13 08:05), 0.3-3 (2015-02-02 07:33), 0.3 (2014-09-24 12:12), 0.4-1 (2015-05-04 11:54), 0.4-4 (2015-06-26 10:49), 0.4-5 (2015-08-17 09:33), 0.4-7 (2016-06-24 09:53), 0.4 (2015-04-13 22:36), 1.0-0 (2017-07-11 12:46), 1.0-1 (2017-07-26 23:56), 1.0-2 (2017-09-14 18:13), 1.0-4 (2018-10-27 09:00), 1.0-5 (2023-02-11 11:10), 1.0-6 (2023-07-16 20:00), 1.0-7 (2024-01-09 06:20), 1.0-8 (2024-11-01 07:50), (2026-07-09 07:57)
Other packages that cited ASMap R package
View ASMap citation profile
Other R packages that ASMap depends, imports, suggests or enhances
Complete documentation for ASMap
Functions, R codes and Examples using the ASMap R package
Some associated functions: ASMap-internal . ASMap-package . alignCross . breakCross . combineMap . fixClones . genClones . heatMap . mapBC . mapBCu . mapDH . mapDHf . mapF2 . mergeCross . mstmap.cross . mstmap.data.frame . pValue . pp.init . profileGen . profileMark . pullCross . pushCross . quickEst . statGen . statMark . subsetCross . 
Some associated R codes: mstmap14.R .  Full ASMap package functions and examples
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