Other packages > Find by keyword >

maldipickr  

Dereplicate and Cherry-Pick Mass Spectrometry Spectra
View on CRAN: Click here


Download and install maldipickr package within the R console
Install from CRAN:
install.packages("maldipickr")

Install from Github:
library("remotes")
install_github("cran/maldipickr")

Install by package version:
library("remotes")
install_version("maldipickr", "1.3.3")



Attach the package and use:
library("maldipickr")
Maintained by
Charlie Pauvert
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-09-07
Latest Update: 2024-09-12
Description:
Convenient wrapper functions for the analysis of matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) spectra data in order to select only representative spectra (also called cherry-pick). The package covers the preprocessing and dereplication steps (based on Strejcek, Smrhova, Junkova and Uhlik (2018) ) needed to cluster MALDI-TOF spectra before the final cherry-picking step. It enables the easy exclusion of spectra and/or clusters to accommodate complex cherry-picking strategies. Alternatively, cherry-picking using taxonomic identification MALDI-TOF data is made easy with functions to import inconsistently formatted reports.
How to cite:
Charlie Pauvert (2023). maldipickr: Dereplicate and Cherry-Pick Mass Spectrometry Spectra. R package version 1.3.3, https://cran.r-project.org/web/packages/maldipickr. Accessed 27 Oct. 2026.
Previous versions and publish date:
(2026-07-09 06:27), 1.1.1 (2023-09-07 20:10), 1.2.0 (2023-10-25 14:30), 1.3.0 (2023-12-14 13:30), 1.3.1 (2024-09-12 22:00)
Other packages that cited maldipickr R package
View maldipickr citation profile
Other R packages that maldipickr depends, imports, suggests or enhances
Complete documentation for maldipickr
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
exams2learnr  
Interface for 'exams' Exercises in 'learnr' Tutorials
Automatic generation of quizzes or individual questions for 'learnr' tutorials based on 'R/exams' ex ...
Download / Learn more Package Citations See dependency  
SGB  
Simplicial Generalized Beta Regression
Main properties and regression procedures using a generalization of the Dirichlet distribution calle ...
Download / Learn more Package Citations See dependency  
spanish  
Translate Quantities from Strings to Integer and Back. Misc Functions on Spanish Data
Character vector to numerical translation in Euros from Spanish spelled monetary quantities. Reverse ...
Download / Learn more Package Citations See dependency  
usemodels  
Boilerplate Code for 'Tidymodels' Analyses
Code snippets to fit models using the tidymodels framework can be easily created for a given data se ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA