Other packages > Find by keyword >

lgpr  

Longitudinal Gaussian Process Regression
View on CRAN: Click here


Download and install lgpr package within the R console
Install from CRAN:
install.packages("lgpr")

Install from Github:
library("remotes")
install_github("cran/lgpr")

Install by package version:
library("remotes")
install_version("lgpr", "1.2.5")



Attach the package and use:
library("lgpr")
Maintained by
Juho Timonen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-06-21
Latest Update: 2023-09-24
Description:
Interpretable nonparametric modeling of longitudinal data using additive Gaussian process regression. Contains functionality for inferring covariate effects and assessing covariate relevances. Models are specified using a convenient formula syntax, and can include shared, group-specific, non-stationary, heterogeneous and temporally uncertain effects. Bayesian inference for model parameters is performed using 'Stan'. The modeling approach and methods are described in detail in Timonen et al. (2021) .
How to cite:
Juho Timonen (2021). lgpr: Longitudinal Gaussian Process Regression. R package version 1.2.5, https://cran.r-project.org/web/packages/lgpr. Accessed 12 Mar. 2026.
Previous versions and publish date:
1.1.3 (2021-06-21 10:00), 1.1.4 (2021-08-11 07:00), 1.1.5 (2021-09-23 17:00), 1.2.3 (2023-04-06 06:50), 1.2.4 (2023-09-24 08:50)
Other packages that cited lgpr R package
View lgpr citation profile
Other R packages that lgpr depends, imports, suggests or enhances
Complete documentation for lgpr
Functions, R codes and Examples using the lgpr R package
Some associated functions: GaussianPrediction-class . KernelComputer-class . Prediction-class . add_dis_age . add_factor . add_factor_crossing . adjusted_c_hat . apply_scaling . as_character . create_model.covs_and_comps . create_model.formula . create_model.likelihood . create_model . create_model.options . create_model.prior . create_plot_df . create_scaling . dinvgamma_stanlike . draw_pred . example_fit . fit_summary . get_draws . get_pred . kernel . lgp . lgpexpr-class . lgpfit-class . lgpformula-class . lgpmodel-class . lgpr-package . lgprhs-class . lgpscaling-class . lgpsim-class . lgpterm-class . model_summary . new_x . operations . plot_api_c . plot_api_g . plot_components . plot_data . plot_draws . plot_inputwarp . plot_invgamma . plot_pred . plot_sim . ppc . pred . prior_pred . prior_to_num . priors . read_proteomics_data . relevances . s4_generics . sample_model . select . show . sim.create_f . sim.create_x . sim.create_y . sim.kernels . simulate_data . split . testdata_001 . testdata_002 . validate . var_mask . warp_input . 
Some associated R codes: RcppExports.R . aaa.R . main-create_model.R . main-datautil.R . main-draw_pred.R . main-fit_model.R . main-get_pred.R . main-plot_pred.R . main-ppc.R . main-pred.R . main-prior_pred.R . main-relevances.R . main-select.R . methods-KernelComputer.R . methods-Prediction.R . methods-lgpfit.R . methods-lgpformula.R . methods-lgpmodel.R . methods-lgpsim.R . misc-invgamma.R . misc-simulate.R . stanmodels.R . utils-argcheck.R . utils-create_model-covariates.R . utils-create_model-formula.R . utils-create_model-likelihood.R . utils-create_model-prior.R . utils-kernel.R . utils-kernel_reference.R . utils-misc.R . utils-obs_model.R . utils-plot.R . utils-pred.R . zzz.R .  Full lgpr package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

sloop  
Helpers for 'OOP' in R
A collection of helper functions designed to help you to better understand object oriented programmi ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
threewords  
Represent Precise Coordinates in Three Words
A connector to the 'What3Words' (http://what3words.co ...
Download / Learn more Package Citations See dependency  
funnelR  
Funnel Plots for Proportion Data
A set of simplified functions for creating funnel plots for proportion data. This package supports u ...
Download / Learn more Package Citations See dependency  
riskCommunicator  
G-Computation to Estimate Interpretable Epidemiological Effects
Estimates flexible epidemiological effect measures including both differences and ratios using the p ...
Download / Learn more Package Citations See dependency  
impactflu  
Quantification of Population-Level Impact of Vaccination
Implements the compartment model from Tokars (2018) . This ena ...
Download / Learn more Package Citations See dependency  

26,293

R Packages

225,784

Dependencies

70,376

Author Associations

26,294

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA