Other packages > Find by keyword >

gJLS2  

A Generalized Joint Location and Scale Framework for Association Testing
View on CRAN: Click here


Download and install gJLS2 package within the R console
Install from CRAN:
install.packages("gJLS2")

Install from Github:
library("remotes")
install_github("cran/gJLS2")

Install by package version:
library("remotes")
install_version("gJLS2", "0.2.0")



Attach the package and use:
library("gJLS2")
Maintained by
Wei Deng
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2021-09-30
Latest Update: 2021-09-30
Description:
An update to the Joint Location-Scale (JLS) testing framework that identifies associated SNPs, gene-sets and pathways with main and/or interaction effects on quantitative traits (Soave et al., 2015; ). The JLS method simultaneously tests the null hypothesis of equal mean and equal variance across genotypes, by aggregating association evidence from the individual location/mean-only and scale/variance-only tests using Fisher's method. The generalized joint location-scale (gJLS) framework has been developed to deal specifically with sample correlation and group uncertainty (Soave and Sun, 2017; ). The current release: gJLS2, include additional functionalities that enable analyses of X-chromosome genotype data through novel methods for location (Chen et al., 2021; ) and scale (Deng et al., 2019; ).
How to cite:
Wei Deng (2021). gJLS2: A Generalized Joint Location and Scale Framework for Association Testing. R package version 0.2.0, https://cran.r-project.org/web/packages/gJLS2. Accessed 07 Mar. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited gJLS2 R package
View gJLS2 citation profile
Other R packages that gJLS2 depends, imports, suggests or enhances
Complete documentation for gJLS2
Functions, R codes and Examples using the gJLS2 R package
Some associated functions: chrXdat . gJLS2 . gJLS2s . leveneRegA_per_SNP . leveneRegX_per_SNP . leveneTests_per_SNP . locReg . scaleReg . 
Some associated R codes: LeveneReg22.R . LeveneRegX.R . LeveneTest.R . LocationTest.R . ScaleTest.R . chrXdat.R . gJLS.R . gJLSs.R . helperFunctions.R .  Full gJLS2 package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

SAMtool  
Stock Assessment Methods Toolkit
Simulation tools for closed-loop simulation are provided for the 'MSEtool' operating model to inform ...
Download / Learn more Package Citations See dependency  
portalr  
Create Useful Summaries of the Portal Data
Download and generate summaries for the rodent, plant, ant, and weather data from the Portal Projec ...
Download / Learn more Package Citations See dependency  
lmSubsets  
Exact Variable-Subset Selection in Linear Regression
Exact and approximation algorithms for variable-subset selection in ordinary linear regression mode ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
ReviewR  
A Light-Weight, Portable Tool for Reviewing Individual Patient Records
A portable Shiny tool to explore patient-level electronic health record data and perform chart revi ...
Download / Learn more Package Citations See dependency  
testDriveR  
Teaching Data for Statistics and Data Science
Provides data sets for teaching statistics and data science courses. It includes a sample of data f ...
Download / Learn more Package Citations See dependency  

26,264

R Packages

223,360

Dependencies

70,376

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA