R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
ftrCOOL
View on CRAN: Click
here
Download and install ftrCOOL package within the R console
Install from CRAN:
install.packages("ftrCOOL")
Install from Github:
library("remotes")
install_github("cran/ftrCOOL") Install by package version:
library("remotes")
install_version("ftrCOOL", "2.0.0") Attach the package and use:
library("ftrCOOL")
Maintained by
Sare Amerifar
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-08-31
Latest Update: 2021-11-29
Description:
Extracts features from biological sequences. It contains most features which are presented in related work and also includes features which have never been introduced before. It extracts numerous features from nucleotide and peptide sequences. Each feature converts the input sequences to discrete numbers in order to use them as predictors in machine learning models. There are many features and information which are hidden inside a sequence. Utilizing the package, users can convert biological sequences to discrete models based on chosen properties. References: 'iLearn' 'Z. Chen et al.' (2019) . 'iFeature' 'Z. Chen et al.' (2018) . . 'PseKRAAC' 'Y. Zuo et al.' 'PseKRAAC: a flexible web server for generating pseudo K-tuple reduced amino acids composition' (2017) . 'iDNA6mA-PseKNC' 'P. Feng et al.' 'iDNA6mA-PseKNC: Identifying DNA N6-methyladenosine sites by incorporating nucleotide physicochemical properties into PseKNC' (2019) . 'I. Dubchak et al.' 'Prediction of protein folding class using global description of amino acid sequence' (1995) . 'W. Chen et al.' 'Identification and analysis of the N6-methyladenosine in the Saccharomyces cerevisiae transcriptome' (2015) .
How to cite:
Sare Amerifar (2020). ftrCOOL: Feature Extraction from Biological Sequences. R package version 2.0.0, https://cran.r-project.org/web/packages/ftrCOOL. Accessed 02 Nov. 2026.
Previous versions and publish date:
Other packages that cited ftrCOOL R package
View ftrCOOL citation profile
Other R packages that ftrCOOL depends,
imports, suggests or enhances
Complete documentation for ftrCOOL
Functions, R codes and Examples using
the ftrCOOL R package
Some associated functions: AA2Binary . AAKpartComposition . AAindex . AAutoCor . AESNN3 . ANF_DNA . ANF_RNA . APAAC . APkNUCTri_DNA . APkNUCdi_DNA . APkNUCdi_RNA . ASA . ASDC . ASDC_DNA . ASDC_RNA . AutoCorDiNUC_DNA . AutoCorDiNUC_RNA . AutoCorTriNUC_DNA . BLOSUM62 . CTD . CTDC . CTDD . CTDT . CkSAApair . CkSGAApair . CkSNUCpair_DNA . CkSNUCpair_RNA . CodonFraction . CodonUsage_DNA . CodonUsage_RNA . DDE . DPCP_DNA . DPCP_RNA . DiNUC2Binary_DNA . DiNUC2Binary_RNA . DiNUCindex_DNA . DiNUCindex_RNA . DisorderB . DisorderC . DisorderS . DistancePair . EAAComposition . EGAAComposition . EIIP . ENUComposition_DNA . ENUComposition_RNA . EffectiveNumberCodon . ExpectedValKmerNUC_DNA . ExpectedValKmerNUC_RNA . ExpectedValueAA . ExpectedValueGAA . ExpectedValueGKmerAA . ExpectedValueKmerAA . GAAKpartComposition . G_Ccontent_DNA . G_Ccontent_RNA . GrpDDE . KNNPeptide . KNNProtein . KNN_DNA . KNN_RNA . LocalPoSpKAAF . LocalPoSpKNUCF_DNA . LocalPoSpKNUCF_RNA . MMI_DNA . MMI_RNA . Mismatch_DNA . Mismatch_RNA . NCP_DNA . NCP_RNA . NUC2Binary_DNA . NUC2Binary_RNA . NUCKpartComposition_DNA . NUCKpartComposition_RNA . OPF_10bit . OPF_7bit_T1 . OPF_7bit_T2 . OPF_7bit_T3 . PCPseDNC . PS2_DNA . PS2_RNA . PS3_DNA . PS3_RNA . PS4_DNA . PS4_RNA . PSEAAC . PSEkNUCTri_DNA . PSEkNUCdi_DNA . PSEkNUCdi_RNA . PSSM . PSTNPds . PSTNPss_DNA . PSTNPss_RNA . PseEIIP . PseKRAAC_T1 . PseKRAAC_T10 . PseKRAAC_T11 . PseKRAAC_T12 . PseKRAAC_T13 . PseKRAAC_T14 . PseKRAAC_T15 . PseKRAAC_T16 . PseKRAAC_T2 . PseKRAAC_T3A . PseKRAAC_T3B . PseKRAAC_T4 . PseKRAAC_T5 . PseKRAAC_T6A . PseKRAAC_T6B . PseKRAAC_T7 . PseKRAAC_T8 . PseKRAAC_T9 . QSOrder . SAAC . SGAAC . SOCNumber . SSEB . SSEC . SSES . TPCP_DNA . TorsionAngle . TriNUCindex_DNA . Zcurve12bit_DNA . Zcurve12bit_RNA . Zcurve144bit_DNA . Zcurve144bit_RNA . Zcurve36bit_DNA . Zcurve36bit_RNA . Zcurve48bit_DNA . Zcurve48bit_RNA . Zcurve9bit_DNA . Zcurve9bit_RNA . alphabetCheck . binary_3bit_T1 . binary_3bit_T2 . binary_3bit_T3 . binary_3bit_T4 . binary_3bit_T5 . binary_3bit_T6 . binary_3bit_T7 . binary_5bit_T1 . binary_5bit_T2 . binary_6bit . codonAdaptionIndex . conjointTriad . conjointTriadKS . fa.read . fickettScore . kAAComposition . kGAAComposition . kNUComposition_DNA . kNUComposition_RNA . maxORF . maxORF_RNA . maxORFlength_DNA . maxORFlength_RNA . nameKmer . needleman . nonStandardSeq . readASAdir . readDisDir . readPSSMdir . readTorsionDir . readss2Dir . revComp . zSCALE .
Some associated R codes: AA2Binary.R . AAKpartComposition.R . AAindex.R . AAutoCor.R . AESNN3.R . ANF_DNA.R . ANF_RNA.R . APAAC.R . APkNUCTri_DNA.R . APkNUCdi_DNA.R . APkNUCdi_RNA.R . ASA.R . ASDC.R . ASDC_DNA.R . ASDC_RNA.R . AutoCorDiNUC_DNA.R . AutoCorDiNUC_RNA.R . AutoCorTriNUC_DNA.R . Blosum62.R . CTD.R . CTDC.R . CTDD.R . CTDT.R . CkSAApair.R . CkSGAApair.R . CkSNUCpair_DNA.R . CkSNUCpair_RNA.R . CodonFraction.R . CodonUsage_DNA.R . CodonUsage_RNA.R . DDE.R . DPCP_DNA.R . DPCP_RNA.R . DiNUC2Binary_DNA.R . DiNUC2Binary_RNA.R . DiNUCindex_DNA.R . DiNUCindex_RNA.R . DisorderB.R . DisorderC.R . DisorderS.R . DistancePair.R . EAAComposition.R . EGAAComposition.R . EIIP.R . ENUComposition_DNA.R . ENUComposition_RNA.R . EffectiveNumberOfCodon.R . ExpectedValKmerNUC_DNA.R . ExpectedValKmerNUC_RNA.R . ExpectedValueAA.R . ExpectedValueGAA.R . ExpectedValueGKmerAA.R . ExpectedValueKmerAA.R . GAAKpartComposition.R . G_Ccontent_DNA.R . G_Ccontent_RNA.R . GrpDDE.R . KNNPeptide.R . KNNProtein.R . KNN_DNA.R . KNN_RNA.R . LocalPoSpKAAF.R . LocalPoSpKNUCF_DNA.R . LocalPoSpKNUCF_RNA.R . MMI_DNA.R . MMI_RNA.R . Mismatch_DNA.R . Mismatch_RNA.R . NCP_DNA.R . NCP_RNA.R . NUC2Binary_DNA.R . NUC2Binary_RNA.R . NUCKpartComposition_DNA.R . NUCKpartComposition_RNA.R . OPF_10bit.R . OPF_7bit_T1.R . OPF_7bit_T2.R . OPF_7bit_T3.R . PCPseDNC.R . PS2_DNA.R . PS2_RNA.R . PS3_DNA.R . PS3_RNA.R . PS4_DNA.R . PS4_RNA.R . PSEAAC.R . PSEkNUCTri_DNA.R . PSEkNUCdi_DNA.R . PSEkNUCdi_RNA.R . PSSM.R . PSTNPds.R . PSTNPss_DNA.R . PSTNPss_RNA.R . PseEIIP.R . PseKRAAC_T1.R . PseKRAAC_T10.R . PseKRAAC_T11.R . PseKRAAC_T12.R . PseKRAAC_T13.R . PseKRAAC_T14.R . PseKRAAC_T15.R . PseKRAAC_T16.R . PseKRAAC_T2.R . PseKRAAC_T3A.R . PseKRAAC_T3B.R . PseKRAAC_T4.R . PseKRAAC_T5.R . PseKRAAC_T6A.R . PseKRAAC_T6B.R . PseKRAAC_T7.R . PseKRAAC_T8.R . PseKRAAC_T9.R . QSOrder.R . SAAC.R . SGAAC.R . SOCNumber.R . SSEB.R . SSEC.R . SSES.R . TPCP_DNA.R . TorsionAngle.R . TriNUCindex_DNA.R . Zcurve12bit_DNA.R . Zcurve12bit_RNA.R . Zcurve144bit_DNA.R . Zcurve144bit_RNA.R . Zcurve36bit_DNA.R . Zcurve36bit_RNA.R . Zcurve48bit_DNA.R . Zcurve48bit_RNA.R . Zcurve9bit_DNA.R . Zcurve9bit_RNA.R . alphabetCheck.R . binary_3bit_T1.R . binary_3bit_T2.R . binary_3bit_T3.R . binary_3bit_T4.R . binary_3bit_T5.R . binary_3bit_T6.R . binary_3bit_T7.R . binary_5bit_T1.R . binary_5bit_T2.R . binary_6bit.R . codonAdaptionIndex.R . conjointTrKS.R . conjointTriad.R . fa.read.R . fickettScore.R . kAAComposition.R . kGAAComposition.R . kNUComposition_DNA.R . kNUComposition_RNA.R . maxORF.R . maxORF_RNA.R . maxORFlength_DNA.R . maxORFlength_RNA.R . nameKmer.R . needleman.R . nonStandardSeq.R . readASAdir.R . readDisDir.R . readPSSMdir.R . readTorsionDir.R . readss2Dir.R . revComp.R . zSCALE.R . Full ftrCOOL package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
SemiEstimate
Semi-parametric estimation problem can be solved by two-step Newton-Raphson iteration. The implicit ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Jinhua Su (view profile)
VFP
Variance function estimation for models proposed by W. Sadler in his variance function program ('VF ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Andre Schuetzenmeister (view profile)
aws.translate
A client for 'AWS Translate' , a machine translation ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Antoine Sachet (view profile)
palaeoverse
Provides functionality to support data preparation and exploration for
palaeobiological analyses, i ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Lewis A. Jones (view profile)
quickcode
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
EDOtrans
A data transformation method which takes into account the special property of scale non-invariance w ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Jorn Lotsch (view profile)
29,315
R Packages
247,686
Dependencies
77,531
Author Associations
29,316
Publication Badges
