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PhySortR  

A Fast, Flexible Tool for Sorting Phylogenetic Trees
View on CRAN: Click here


Download and install PhySortR package within the R console
Install from CRAN:
install.packages("PhySortR")

Install from Github:
library("remotes")
install_github("cran/PhySortR")

Install by package version:
library("remotes")
install_version("PhySortR", "1.0.9")



Attach the package and use:
library("PhySortR")
Maintained by
Timothy Stephens
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-12-16
Latest Update: 2025-02-13
Description:
Screens and sorts phylogenetic trees in both traditional and extended Newick format. Allows for the fast and flexible screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non- Exclusive clades that includes a defined portion of non-target taxa.
How to cite:
Timothy Stephens (2015). PhySortR: A Fast, Flexible Tool for Sorting Phylogenetic Trees. R package version 1.0.9, https://cran.r-project.org/web/packages/PhySortR. Accessed 29 Oct. 2026.
Previous versions and publish date:
(2026-07-09 08:17), 1.0.2 (2015-12-16 15:10), 1.0.3 (2015-12-21 08:54), 1.0.5 (2016-01-11 11:04), 1.0.6 (2016-03-23 00:56), 1.0.7 (2016-05-16 14:33), 1.0.8 (2018-08-06 09:00)
Other packages that cited PhySortR R package
View PhySortR citation profile
Other R packages that PhySortR depends, imports, suggests or enhances
Complete documentation for PhySortR
Functions, R codes and Examples using the PhySortR R package
Some associated functions: PhySortR . convert.eNewick . sortTrees . 
Some associated R codes: convert.eNewick.R . sortTrees.R .  Full PhySortR package functions and examples
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