Other packages > Find by keyword >

PhySortR  

A Fast, Flexible Tool for Sorting Phylogenetic Trees
View on CRAN: Click here


Download and install PhySortR package within the R console
Install from CRAN:
install.packages("PhySortR")

Install from Github:
library("remotes")
install_github("cran/PhySortR")

Install by package version:
library("remotes")
install_version("PhySortR", "1.0.9")



Attach the package and use:
library("PhySortR")
Maintained by
Timothy Stephens
[Scholar Profile | Author Map]
First Published: 2015-12-16
Latest Update: 2018-08-06
Description:
Screens and sorts phylogenetic trees in both traditional and extended Newick format. Allows for the fast and flexible screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non- Exclusive clades that includes a defined portion of non-target taxa.
How to cite:
Timothy Stephens (2015). PhySortR: A Fast, Flexible Tool for Sorting Phylogenetic Trees. R package version 1.0.9, https://cran.r-project.org/web/packages/PhySortR. Accessed 10 Apr. 2025.
Previous versions and publish date:
1.0.2 (2015-12-16 15:10), 1.0.3 (2015-12-21 08:54), 1.0.5 (2016-01-11 11:04), 1.0.6 (2016-03-23 00:56), 1.0.7 (2016-05-16 14:33), 1.0.8 (2018-08-06 09:00)
Other packages that cited PhySortR R package
View PhySortR citation profile
Other R packages that PhySortR depends, imports, suggests or enhances
Complete documentation for PhySortR
Functions, R codes and Examples using the PhySortR R package
Some associated functions: PhySortR . convert.eNewick . sortTrees . 
Some associated R codes: convert.eNewick.R . sortTrees.R .  Full PhySortR package functions and examples
Downloads during the last 30 days
03/1103/1203/1303/1403/1503/1603/1803/2003/2103/2203/2303/2403/2503/2703/2803/3003/3104/0104/0204/0304/0404/0504/0604/0704/08Downloads for PhySortR24681012141618TrendBars

Today's Hot Picks in Authors and Packages

webglobe  
3D Interactive Globes
Displays geospatial data on an interactive 3D globe in the web browser. ...
Download / Learn more Package Citations See dependency  
GRNNs  
General Regression Neural Networks Package
This General Regression Neural Networks Package uses various distance functions. It was motivated b ...
Download / Learn more Package Citations See dependency  
ecochange  
Integrating Ecosystem Remote Sensing Products to Derive EBV Indicators
Essential Biodiversity Variables (EBV) are state variables with dimensions on time, space, and biolo ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
RODBC  
ODBC Database Access
xtermStyle  
Terminal Text Formatting Using Escape Sequences
Can be used for coloring output in terminals. It was developed for the standard Ubuntu terminal but ...
Download / Learn more Package Citations See dependency  

24,012

R Packages

207,311

Dependencies

64,867

Author Associations

24,013

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA