Other packages > Find by keyword >

PhySortR  

A Fast, Flexible Tool for Sorting Phylogenetic Trees
View on CRAN: Click here


Download and install PhySortR package within the R console
Install from CRAN:
install.packages("PhySortR")

Install from Github:
library("remotes")
install_github("cran/PhySortR")

Install by package version:
library("remotes")
install_version("PhySortR", "1.0.8")



Attach the package and use:
library("PhySortR")
Maintained by
Timothy Stephens
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-12-16
Latest Update: 2018-08-06
Description:
Screens and sorts phylogenetic trees in both traditional and extended Newick format. Allows for the fast and flexible screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non- Exclusive clades that includes a defined portion of non-target taxa.
How to cite:
Timothy Stephens (2015). PhySortR: A Fast, Flexible Tool for Sorting Phylogenetic Trees. R package version 1.0.8, https://cran.r-project.org/web/packages/PhySortR. Accessed 21 Nov. 2024.
Previous versions and publish date:
1.0.2 (2015-12-16 15:10), 1.0.3 (2015-12-21 08:54), 1.0.5 (2016-01-11 11:04), 1.0.6 (2016-03-23 00:56), 1.0.7 (2016-05-16 14:33)
Other packages that cited PhySortR R package
View PhySortR citation profile
Other R packages that PhySortR depends, imports, suggests or enhances
Complete documentation for PhySortR
Functions, R codes and Examples using the PhySortR R package
Some associated functions: PhySortR . convert.eNewick . sortTrees . 
Some associated R codes: convert.eNewick.R . sortTrees.R .  Full PhySortR package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

SCBiclust  
Identifies Mean, Variance, and Hierarchically Clustered Biclusters
Identifies a bicluster, a submatrix of the data such that the features and observations within the s ...
Download / Learn more Package Citations See dependency  
crossrun  
Joint Distribution of Number of Crossings and Longest Run
Joint distribution of number of crossings and the longest run in a series of independent Bernoulli ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
pkgdepends  
Package Dependency Resolution and Downloads
Find recursive dependencies of 'R' packages from various sources. Solve the dependencies to obtain ...
Download / Learn more Package Citations See dependency  
RcppHNSW  
'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors
'Hnswlib' is a C++ library for Approximate Nearest Neighbors. This package provides a minimal R int ...
Download / Learn more Package Citations See dependency  
kgschart  
KGS Rank Graph Parser
Restore underlining numeric data from rating history graph of KGS (an online platform of the game o ...
Download / Learn more Package Citations See dependency  

23,229

R Packages

199,929

Dependencies

62,984

Author Associations

23,230

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA