Other packages > Find by keyword >

denovolyzeR  

Statistical Analyses of De Novo Genetic Variants
View on CRAN: Click here


Download and install denovolyzeR package within the R console
Install from CRAN:
install.packages("denovolyzeR")

Install from Github:
library("remotes")
install_github("cran/denovolyzeR")

Install by package version:
library("remotes")
install_version("denovolyzeR", "0.2.0")



Attach the package and use:
library("denovolyzeR")
Maintained by
James Ware
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-04-09
Latest Update: 2016-08-01
Description:
An integrated toolset for the analysis of de novo (sporadic) genetic sequence variants. denovolyzeR implements a mutational model that estimates the probability of a de novo genetic variant arising in each human gene, from which one can infer the expected number of de novo variants in a given population size. Observed variant frequencies can then be compared against expectation in a Poisson framework. denovolyzeR provides a suite of functions to implement these analyses for the interpretation of de novo variation in human disease.
How to cite:
James Ware (2015). denovolyzeR: Statistical Analyses of De Novo Genetic Variants. R package version 0.2.0, https://cran.r-project.org/web/packages/denovolyzeR
Previous versions and publish date:
0.1.0 (2015-04-09 12:03), 0.1.1 (2016-06-18 15:01)
Other packages that cited denovolyzeR R package
View denovolyzeR citation profile
Other R packages that denovolyzeR depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

bizicount  
Bivariate Zero-Inflated Count Models Using Copulas
Maximum likelihood estimation of copula-based zero-inflated (and non-inflated) Poisson and negative ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resizer for Images, Tables and Fancy Resizable Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
QuantileNPCI  
Nonparametric Confidence Intervals for Quantiles
Based on Alan D. Hutson (1999) , "Calculating nonparametric confidence i ...
Download / Learn more Package Citations See dependency  
Maintainer: Li Yan (view profile)
factorplot  
Graphical Presentation of Simple Contrasts
Methods to calculate, print, summarize and plot pairwise differences from GLMs, GLHT or Multinomial ...
Download / Learn more Package Citations See dependency  
FMCCSD  
Efficient Estimation of Clustered Current Status Data
Current status data abounds in the field of epidemiology and public health, where the only observab ...
Download / Learn more Package Citations See dependency  
srm  
Structural Equation Modeling for the Social Relations Model
Provides functionality for structural equation modeling for the social relations model (Kenny & ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns