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dataone  

R Interface to the 'DataONE' REST API
View on CRAN: Click here


Download and install dataone package within the R console
Install from CRAN:
install.packages("dataone")

Install from Github:
library("remotes")
install_github("cran/dataone")

Install by package version:
library("remotes")
install_version("dataone", "2.3.0")



Attach the package and use:
library("dataone")
Maintained by
Matthew B. Jones
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2013-02-25
Latest Update: 2025-09-01
Description:
Provides read and write access to data and metadata from the DataONE network of data repositories. Each DataONE repository implements a consistent repository application programming interface. Users call methods in R to access these remote repository functions, such as methods to query the metadata catalog, get access to metadata for particular data packages, and read the data objects from the data repository. Users can also insert and update data objects on repositories that support these methods.
How to cite:
Matthew B. Jones (2013). dataone: R Interface to the 'DataONE' REST API. R package version 2.3.0, https://cran.r-project.org/web/packages/dataone. Accessed 06 Mar. 2026.
Previous versions and publish date:
1.0.0 (2013-02-25 07:44), 2.0.0 (2016-05-27 20:28), 2.0.1 (2016-08-30 01:33), 2.1.0 (2017-08-18 18:53), 2.1.1 (2018-06-28 07:47), 2.1.2 (2019-01-29 22:40), 2.1.3 (2020-01-31 14:20), 2.1.4 (2020-02-16 06:20), 2.2.1 (2020-12-06 07:20), 2.2.2 (2022-06-10 21:30)
Other packages that cited dataone R package
View dataone citation profile
Other R packages that dataone depends, imports, suggests or enhances
Complete documentation for dataone
Functions, R codes and Examples using the dataone R package
Some associated functions: AbstractTableDescriber-class . AuthenticationManager-class . AuthenticationManager . CNode-class . CNode . CertificateManager-class . CertificateManager . D1Client-class . D1Client-initialize . D1Client . D1Node-class . D1Node-initialize . D1Node . D1Object-class . D1Object-initialize . D1Object . EMLParser-class . EMLParser . MNode-class . MNode . addData . archive . asDataFrame . auth_delete . auth_get . auth_head . auth_post . auth_put . auth_put_post_delete . canRead . convert.csv . createD1Object . createDataPackage . createObject . d1IdentifierSearch . d1SolrQuery . d1_errors . data.characterEncoding . data.formatFamily . data.tableAttributeNames . data.tableAttributeOrientation . data.tableAttributeStorageTypes . data.tableAttributeTypes . data.tableFieldDelimiter . data.tableMissingValueCodes . data.tableQuoteCharacter . data.tableSkipLinesHeader . dataone-defunct . dataone-deprecated . dataone . describeObject . documented.d1Identifiers . documented.entityNames . documented.sizes . downloadCert . downloadObject . echoCredentials . encodeSolr . encodeUrlPath . encodeUrlQuery . evaluateAuth . generateIdentifier . getAuthExpires . getAuthMethod . getAuthSubject . getCN . getCapabilities . getCert . getCertExpires . getCertInfo . getCertLocation . getChecksum . getD1Object . getData . getDataObject . getDataPackage . getEndpoint . getErrorDescription . getFormat . getFormatId . getIdentifier . getMN . getMNode . getMNodeId . getMetadataMember . getObject . getPackage . getQueryEngineDescription . getSystemMetadata . getToken . getTokenInfo . get_user_agent . hasReservation . isAuthExpired . isAuthValid . isAuthorized . isCertExpired . listFormats . listMemberNodes . listNodes . listObjects . listQueryEngines . obscureAuth . obscureCert . parseCapabilities . parseSolrResult . ping . query . reserveIdentifier . resolve . restoreAuth . restoreCert . setMNodeId . setObsoletedBy . setPublicAccess . showAuth . showClientSubject . updateObject . updateSystemMetadata . uploadDataObject . uploadDataPackage . 
Some associated R codes: AbstractTableDescriber.R . AuthenticationManager.R . CNode.R . CertificateManager.R . D1Client.R . D1Node.R . D1Object.R . EMLParser.R . MNode.R . auth_request.R . dataone-defunct.R . dataone-deprecated.R . dataone-package.R .  Full dataone package functions and examples
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